Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004490 |
Symbol | |
ID | 8558258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 3213835 |
End bp | 3214902 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646407619 |
Product | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase |
Protein accession | YP_003287113 |
Protein GI | 262395259 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
TIGRFAM ID | [TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAA ATAAACGTTT GATGGTGATG GCTGGTGGTA CTGGCGGTCA CGTATTCCCA GGGTTAGCTG TAGCAAAACA GCTGCAAGAG CAAGGCTGGG AGATCCGTTG GTTAGGCACG GCGGATCGAA TGGAAGCGGA TTTGGTGCCA AAACATGGCA TTGAAATCGA TTTTATCAAA GTGAAAGGGT TACGAGGTCA AGGCGTAAAG CGTCTGCTTG CAGCTCCATT TCAAATTATT AATGCCATCA TGCAAGCTCG GGCGCACATG AAGCATTGGA AGCCCGATGC CGTGTTAGGT ATGGGTGGTT ATGTGAGTGG TCCCGGTGGT ATTGCGGCTT GGTTGAGCGG TATTCCTGTT GTTCTGCACG AACAAAACGC GGTTGCGGGT TTGACAAACC AATGGCTATC AAAAATTGCT AAGAAAGTCT TTCAGGCCTT TCCTGGCGCG TTCCCTGCTG CTGAGGTAGT TGGTAACCCT GTGCGTGAAG ACCTAACAAG ATTAGAAGCA CCTGCAGAGC GAATGCAAGA TCGCCAAGGC CCAATTCGTA TTTTGGTGAT GGGCGGTAGC CAAGGTGCAC GCATTCTTAA CCAAACTGTG CCAGAAGTGA TGGCAAAGCT GGGCGGTGAT TACTGTATTC GTCATCAAGC TGGCAAAGGT TCCGCCGAAG AAGTGAACGC CGCATACCAA GCTAATGGTG TGGTAAATGC AGAAGTCACA GAGTTCATTG ACGACGTAGC AGAGGCTTAT GCATGGGCTG ATCTTTTAGT TTGTCGTTCA GGGGCGTTAA CCGTTTCTGA AGTATCAGCG GCAGGCGTAG GGGCTATCTT TGTTCCTTTT ATGCATAAAG ATCGCCAACA AGCACTGAAT GCCGATCATC TAGTAGAATG CGGCGCAGCG AAAATGATTG AACAACCAGA TTTAACCGTT GAGTCTTTGA CTCAGCAGAT CCAACAATTG GATCGCCAAG CTTTACTTAC GATGGCTGAG CAAGCGCGTG GCGCTGCTAA ATTGAATGCC GACCGAGTTG TCGCACAAGC CATTGTCGCT TTGACCGAAA AGCGTTAA
|
Protein sequence | MKQNKRLMVM AGGTGGHVFP GLAVAKQLQE QGWEIRWLGT ADRMEADLVP KHGIEIDFIK VKGLRGQGVK RLLAAPFQII NAIMQARAHM KHWKPDAVLG MGGYVSGPGG IAAWLSGIPV VLHEQNAVAG LTNQWLSKIA KKVFQAFPGA FPAAEVVGNP VREDLTRLEA PAERMQDRQG PIRILVMGGS QGARILNQTV PEVMAKLGGD YCIRHQAGKG SAEEVNAAYQ ANGVVNAEVT EFIDDVAEAY AWADLLVCRS GALTVSEVSA AGVGAIFVPF MHKDRQQALN ADHLVECGAA KMIEQPDLTV ESLTQQIQQL DRQALLTMAE QARGAAKLNA DRVVAQAIVA LTEKR
|
| |