| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004478 |
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| Symbol | |
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| ID | 8558246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3197771 |
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| End bp | 3201004 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407607 |
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| Product | carbamoyl-phosphate synthase large chain |
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| Protein accession | YP_003287101 |
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| Protein GI | 262395247 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACTGACAT TCAAAGTATT CTAATTCTTG GTGCTGGTCC GATTGTTATC
GGTCAGGCAT GTGAGTTTGA CTACTCTGGC GCACAAGCCT GTAAAGCACT TCGTGAAGAA
GGCTACCGAG TTATTCTGGT TAACTCGAAC CCAGCAACCA TCATGACTGA CCCAGAGATG
GCTGATGCGA CTTACATCGA GCCAATCCAA TGGGAAGTGG TACGCAAGAT CATTGAAAAA
GAGCGTCCAG ATGCAGTTTT GCCAACCATG GGTGGCCAGA CTGCACTTAA CTGTGCGTTA
GATTTAGAGA AGCACGGCGT TCTCGCAGAG TTTGGCGTAG AGATGATTGG TGCAACGGCT
GATGCAATCG ACAAAGCGGA AGACCGTTCT CGTTTTGATA AAGCGATGAA GTCTATCGGC
CTTGAGTGTC CTCGCGCAGA TACAGCGAAG AGCATGGAAG AAGCTTACAA AGTTTTAGAT
ATGGTTGGCT TCCCTTGTAT CATCCGTCCA TCGTTCACCA TGGGCGGCAC TGGTGGTGGT
ATCGCGTACA ACAAAGAAGA GTTCGAAGAA ATCTGTCGTC GCGGTCTGGA CTTATCTCCG
ACCAACGAAC TTCTTATCGA TGAGTCACTA ATCGGTTGGA AAGAGTACGA AATGGAAGTC
GTTCGTGACA AAGCGGACAA CTGTATCATC GTATGTTCAA TCGAAAACTT TGATCCAATG
GGCATCCACA CGGGTGACTC AATCACAGTA GCACCAGCAC AGACACTGAC CGACAAAGAA
TACCAGCTAA TGCGTAATGC ATCGCTAGCC GTTCTACGTG AAATTGGTGT TGAAACAGGT
GGTTCAAACG TACAGTTTGG TATCAACCCG AAAGATGGCC GTATGGTTAT CATCGAGATG
AACCCACGTG TATCTCGTTC TTCTGCGTTA GCGTCAAAAG CGACAGGTTT CCCAATCGCT
AAGATTGCCG CGAAACTGGC TGTTGGCTTT ACTCTGGATG AACTACAAAA CGACATCACC
GGCGGTGCAA CACCAGCATC ATTCGAACCA ACTATCGACT ACGTCGTAAC TAAGATTCCT
CGCTTTAACT TCGAGAAATT TGCTGGCGCA AACGACCGTC TGACTACTCA GATGAAATCG
GTTGGTGAGG TAATGGCAAT TGGTCGTAAC CAACAAGAAT CTCTTCACAA AGCACTTCGT
GGTCTAGAAG TTGGCGCAAC TGGTTTTGAC GAGATGGTCG ATTTAGAAGC ACCAGATGCA
CTGACTAAGA TTCGTCACGA ACTTAAAGAA GCAGGCGCTG AGCGTATCTG GTACATCGCC
GATGCATTCC GAGCTGGCAT GTCAGTTGAC GGCGTGTTCA ACTTGACTCA AATTGACCGT
TGGTTCCTGG TTCAAATCGA AGAAATCGTA AAACTCGAAG AGCAAGTCAA GGCGGGCGGC
TACGCAGGTT TGACCAAAGA AGTGCTTCGC CAGATGAAAC GTAAAGGCTT CTCTGATGCG
CGCTTGTCTA AACTGCTAGG TGTCGCTGAA AGTGAAATTC GCCGTGCTCG TGAGCAGTTT
GATATTCACC CGGTTTACAA ACGTGTGGAT ACGTGTGCGG CTGAGTTTTC TTCTGACACG
GCTTACATGT ACTCATCTTA CGATGAAGAG TGTGAAGCAA ACCCAACAGA CAAAGACAAG
ATCATGGTTC TTGGTGGCGG TCCAAACCGT ATCGGCCAAG GTATTGAATT CGATTACTGT
TGTGTACACG CATCACTTGC GCTGCGTGAA GACGGTTACG AAACCATTAT GGTTAACTGT
AACCCAGAAA CGGTATCTAC TGACTACGAT ACGTCTGATC GCCTGTACTT CGAACCAGTA
ACTCTGGAAG ATGTACTGTC TATCGCTCGC GTTGAAAAAC CAAAAGGTGT GATTGTTCAG
TACGGTGGTC AAACGCCACT TAAACTGGCT CGTGCTCTAG AAGCGGCTGG TGTTCCAATC
ATTGGTACTA GCCCAGATGC TATCGACCGT GCGGAAGACC GTGAACGCTT CCAGGCAGCT
GTTGACCGTC TAGGTCTACT TCAGCCAGAA AACGCGACAG TAACAACGAT GGAACAGGCG
GTTGAAAAAT CGAAAGAAAT TGGCTTCCCA TTAGTTGTTC GTCCATCTTA TGTACTCGGT
GGTCGTGCGA TGGAAATCGT ATACGACGAG CAAGACCTGC GTCGCTACTT CAACGAAGCA
GTAAGCGTAT CGAACGAGTC TCCAGTTCTT CTAGACCGTT TCTTGGATGA TGCAACCGAA
GTTGATATTG ATGCTATCTG TGACGGTGAA CGCGTCGTTA TCGGCGGTAT CATGGAACAC
ATCGAACAAG CGGGTGTTCA CTCTGGTGAC TCTGCATGTT CACTGCCTGC ATACACGCTA
AGTCAGGAAA TTCAAGACAA GATGCGTGAG CAAGTTGAGA AGTTGGCGTT CGAACTCGGT
GTACGCGGTT TGATGAACAC GCAGTTTGCT GTGAAAGACA ACGACGTTTA CCTAATCGAA
GTGAACCCTC GTGCTGCTCG TACGGTACCA TTCGTATCGA AAGCGACAGG TGCACCTCTA
GCGAAAATCG CTGCACGTGT AATGGCGGGT CAATCTCTAG AGTCACAAGG ATTTACTAAA
GAGATTATCC CTCCTTACTA CTCAGTGAAA GAAGTGGTTC TGCCGTTCAA CAAATTCCCT
GGTGTTGACC CTCTATTGGG CCCAGAAATG CGCTCAACAG GTGAAGTAAT GGGTGTTGGT
GCAACGTTCG CAGAAGCTTA CGCGAAAGCA GAGCTAGGTT GTGGTGCAGT TTACCCTGAA
GGTGGTCGTG CGCTACTGTC TGTACGTGAA GGCGATAAAG AGCGTGTTGT TGACCTAGCT
TCTAAGCTAG TGAAACTGGG TTACCAGTTG GATGCGACAC ACGGTACTGC TGTGATTCTG
GGCGAAGCGG GTATCAACCC ACGCTTGGTA AACAAAGTAC ACGAAGGTCG TCCACACATT
CTTGACCGCA TCAAGAACAA CGAATACACC TACATCGTAA ACACGGCAGC TGGTCGTCAA
GCGATTGAAG ATTCGAAAGT TCTACGCCGC GGTGCACTGG CAGAAAAAGT GAACTACACA
ACGACACTGA ACGCAGCGTT CGCTACATGT ATGTCTCACA CTGCAGACGC AAAAGCGTCA
GTAACTTCGG TTCAAGAGTT ACACGCTAAA GTGAAAGCGA GTCTAGACGC GTAA
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| Protein sequence | MPKRTDIQSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIQ WEVVRKIIEK ERPDAVLPTM GGQTALNCAL DLEKHGVLAE FGVEMIGATA
DAIDKAEDRS RFDKAMKSIG LECPRADTAK SMEEAYKVLD MVGFPCIIRP SFTMGGTGGG
IAYNKEEFEE ICRRGLDLSP TNELLIDESL IGWKEYEMEV VRDKADNCII VCSIENFDPM
GIHTGDSITV APAQTLTDKE YQLMRNASLA VLREIGVETG GSNVQFGINP KDGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGF TLDELQNDIT GGATPASFEP TIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRN QQESLHKALR GLEVGATGFD EMVDLEAPDA
LTKIRHELKE AGAERIWYIA DAFRAGMSVD GVFNLTQIDR WFLVQIEEIV KLEEQVKAGG
YAGLTKEVLR QMKRKGFSDA RLSKLLGVAE SEIRRAREQF DIHPVYKRVD TCAAEFSSDT
AYMYSSYDEE CEANPTDKDK IMVLGGGPNR IGQGIEFDYC CVHASLALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPV TLEDVLSIAR VEKPKGVIVQ YGGQTPLKLA RALEAAGVPI
IGTSPDAIDR AEDRERFQAA VDRLGLLQPE NATVTTMEQA VEKSKEIGFP LVVRPSYVLG
GRAMEIVYDE QDLRRYFNEA VSVSNESPVL LDRFLDDATE VDIDAICDGE RVVIGGIMEH
IEQAGVHSGD SACSLPAYTL SQEIQDKMRE QVEKLAFELG VRGLMNTQFA VKDNDVYLIE
VNPRAARTVP FVSKATGAPL AKIAARVMAG QSLESQGFTK EIIPPYYSVK EVVLPFNKFP
GVDPLLGPEM RSTGEVMGVG ATFAEAYAKA ELGCGAVYPE GGRALLSVRE GDKERVVDLA
SKLVKLGYQL DATHGTAVIL GEAGINPRLV NKVHEGRPHI LDRIKNNEYT YIVNTAAGRQ
AIEDSKVLRR GALAEKVNYT TTLNAAFATC MSHTADAKAS VTSVQELHAK VKASLDA
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