| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004465 |
|---|
| Symbol | |
|---|
| ID | 8558233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 3176778 |
|---|
| End bp | 3177737 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646407594 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003287088 |
|---|
| Protein GI | 262395234 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1242] Predicted Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTAC ATGAGTTGGT CAATACAATC GGCCAAGATC TTCAGCGTCG ATACGGTGAA
AAAGTCCATA AACTAACGTT GCACGGTGGA TTTAGTTGCC CTAACCGAGA TGGCACTATT
GGTCGGGGAG GATGTACTTT TTGTAATGTG GCTTCGTTTG CGGATGAAGA AGTACAGATA
AAGAGTATTC ACGATCAGTT GAAAGATCGT GCGGGCGAAA TTCATCGAGC GAAGAAGTAT
CTCGCTTATT TTCAGGCTTA CACCAGTACT TATGCGGAAG TGCAAGTGCT GAAAAATATG
TATGAAGAAG CACTAAAAGC GGCTGATATT GTGGGATTGT GTGTCGGGAC TCGTCCAGAT
TGCGTGCCTG ATGCCGTATT AGATTTGCTG TCTGATTATG TACAGCAAGG TTATGAAATT
TGGCTAGAGT TAGGGCTTCA AACCGCTAAT AACGACACCC TTAAGCGCAT CAATCGCGGT
CATGATTTCG AATGTTATGC CGAGATCACC AAGCGTGCGC GTGCGCTAGG TATTAAAGTC
TGTACTCATT TAATTGTTGG ATTACCGAAA GAAAGCCGCG ACGATAACAT TGAGACGCTA
CAAAAAGTGT TAGCCGTGGG CACGGATGGC ATTAAGTTAC ATGGCTTGCA TATTGTGGAA
GGCAGCACGA TGGCGAAAGC GTGGCGTGCA GGACGATTAG AGGCGCCAGA GCTAGAAGAG
TATGTCGCTA TTGCCAGCGA GATGATTCGT ATGACGCCAC CGGACGTGAT TTACCATCGC
GTTTCATCAG CAGCTCGTAG ACCTACCTTA TTATCGCCAC TGTGGTGTGA AAACCGCTGG
CTGGCGATGA CTGAAATTGG TCGCTCCCTC AGTGAACATG GTGCTCAAGG AAGCCTAACG
GGAAACGCTT TTATCTATAC TAAACCGGAA TTAATAGCAG ATCGCTCAAT AAATAACTGA
|
|---|
| Protein sequence | MQLHELVNTI GQDLQRRYGE KVHKLTLHGG FSCPNRDGTI GRGGCTFCNV ASFADEEVQI
KSIHDQLKDR AGEIHRAKKY LAYFQAYTST YAEVQVLKNM YEEALKAADI VGLCVGTRPD
CVPDAVLDLL SDYVQQGYEI WLELGLQTAN NDTLKRINRG HDFECYAEIT KRARALGIKV
CTHLIVGLPK ESRDDNIETL QKVLAVGTDG IKLHGLHIVE GSTMAKAWRA GRLEAPELEE
YVAIASEMIR MTPPDVIYHR VSSAARRPTL LSPLWCENRW LAMTEIGRSL SEHGAQGSLT
GNAFIYTKPE LIADRSINN
|
|---|
| |