| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004441 |
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| Symbol | |
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| ID | 8558209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3151017 |
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| End bp | 3151934 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407570 |
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| Product | site-specific recombinase XerD |
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| Protein accession | YP_003287064 |
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| Protein GI | 262395210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCAC AACAGCCTGT CAATCAACAA GACTTTTCGC TTGTTGAGCA ATTCTTAGAT
GCGATGTGGA TGGAGCGTGG GCTATCAGAG AACACGTTGG CTTCCTATCG AAATGATTTG
ATGAAACTGC TCACGTGGAT GGAGAAACAT CGCTACCGTC TTGATTTCAT TAGTTTGTCT
GGCTTGCAAG AATACCAAAG CTACCTTGTA GACTTGGATT ACAAGCAGAC GTCCCGTGCG
CGTATGTTGT CGGCAATTCG CCGTTTATTC CAATATCTGC ATCGTGAGAA AGTACGTGCT
GATGATCCGA GTGCGCTCTT GGTCAGTCCT AAACTGCCAC AACGCTTGCC CAAAGATATT
AGTGAAGAGC AAGTGGACGC CTTGCTCGAA GCGCCAGACC CGAATGATCC TGTGGAATTG
CGGGATAAAG CGATGCTGGA ACTGCTGTAT GCGACTGGTT TGCGTGTGAC GGAATTGGTC
AGTTTAACTA TGGAAAACAT AAGTTTGCGT CAAGGTGTTG TGCGTGTCAC AGGTAAAGGC
GGTAAAGAGC GCTTAGTGCC AATGGGGGAG AACGCGGTAG ATTGGATCGA GACGTTTATT
CAACAAGGGC GCCCTGCGTT ACTTGGTGAT ACATCATCTG ATATTGTTTT TCCTAGCAAA
CGCGCAAGGC AAATGACTCG TCAGACGTTT TGGCACCGTA TTAAGTACTA TGCTTTGATA
GCAGGGATTG ACACTGAACA GTTGTCGCCG CACGTACTGC GTCATGCCTT TGCCACGCAT
TTATTGAACT ATGGCGCAGA TCTCAGGGTC GTACAGATGC TATTAGGACA TAGTGACTTA
TCGACCACGC AAATTTATAC TCACGTGGCG ACTGAACGAT TGAAGCAGAT CCACAGTCAA
CACCACCCAA GAGCATAA
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| Protein sequence | MTAQQPVNQQ DFSLVEQFLD AMWMERGLSE NTLASYRNDL MKLLTWMEKH RYRLDFISLS
GLQEYQSYLV DLDYKQTSRA RMLSAIRRLF QYLHREKVRA DDPSALLVSP KLPQRLPKDI
SEEQVDALLE APDPNDPVEL RDKAMLELLY ATGLRVTELV SLTMENISLR QGVVRVTGKG
GKERLVPMGE NAVDWIETFI QQGRPALLGD TSSDIVFPSK RARQMTRQTF WHRIKYYALI
AGIDTEQLSP HVLRHAFATH LLNYGADLRV VQMLLGHSDL STTQIYTHVA TERLKQIHSQ
HHPRA
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