| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004424 |
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| Symbol | |
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| ID | 8558192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3131133 |
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| End bp | 3131984 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407553 |
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| Product | transcriptional activator NhaR |
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| Protein accession | YP_003287047 |
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| Protein GI | 262395193 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00877643 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTGCA AACAGGGCTC TGTAACTAAA GCGGCCGATG CGCTTTTCCT GACACCGCAA
ACCGTGACAG GGCAGATTAA AGCGCTTGAA GAACGCATGA AAGGAAAGTT AACCAAACGA
AATGGTCGTA CAGTTGAGCC AACTGAGTTA GGGCAACTTG TTTTTAAGTA CGCCGACCGA
ATGTTTGGTT TGAGTTATGA GATGTTAGAT ATCGTCAATT ACAGTCAGCA CTCGAACATT
CTGTTTGAAG TTGGCGTAGC CGATGCGTTA TCTAAGCGCT TGGTCAGTAA AGTACTAATG
ACGACTGTCC CGGAAGATAA CAGTATTCAT TTACGCTGTT ATGAGTCAAC CCACGAATTG
CTACTTGAAC GACTGTCTCA GCACAAGCTG GATATGATCC TCTCGGATTG TCCCGTTGAC
TCAACTCAAA GCCCTGGCCT TTATAGCAAA AAGCTAGGTG AGAGCAGCAT GAGCTTTTTC
GCCTCTTCTG AAATTGAAAA TGTGCGTTTC CCTGAGATTC TGGAACAGAA AAAGCTTTTG
ATTCCTGCAA GCCGAACAGC AATGGGGCGT AAGGTTATTC AGTGGTTTGA TCGTCAAGGT
CTTCAGCCTA ATGTGTTGGG AGAATTTGAT GATGTTGCGT TGATGAAGGC TTTCGCACGG
TATCACGATG ATGTGATTTT CTTAGCGCCG ACCGTATACA TGTCGGAGAT TGAGGACGAC
CGAAATCTAC AGCTAATTGG TCATGTCGAT GGGTTAAAAG AAGAGTACTA CGTGATTTTT
GCGGAACGAA TGATCCAACA CCCAGCGGTA AAAAATGTTT GTGATGCTGA TTTCAGTCAA
ATGTTTGAGT AA
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| Protein sequence | MVCKQGSVTK AADALFLTPQ TVTGQIKALE ERMKGKLTKR NGRTVEPTEL GQLVFKYADR
MFGLSYEMLD IVNYSQHSNI LFEVGVADAL SKRLVSKVLM TTVPEDNSIH LRCYESTHEL
LLERLSQHKL DMILSDCPVD STQSPGLYSK KLGESSMSFF ASSEIENVRF PEILEQKKLL
IPASRTAMGR KVIQWFDRQG LQPNVLGEFD DVALMKAFAR YHDDVIFLAP TVYMSEIEDD
RNLQLIGHVD GLKEEYYVIF AERMIQHPAV KNVCDADFSQ MFE
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