Gene VEA_004418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004418 
Symbol 
ID8558186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3123624 
End bp3124133 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content41% 
IMG OID646407547 
Productlipoprotein signal peptidase 
Protein accessionYP_003287041 
Protein GI262395187 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AAGCACTGTC TTTAAAGCAA TCTGGTATTC GCTGGTTATG GTTAGCGGTG 
GTTATCTTTT TAGCTGATAT TGGCATTAAG TATGTTGTAA TGAACAACAT GGGATATGGC
TGGGCAAACC GCATAGAAAT TTTGCCATTC TTTAATCTTT TGTACGTGCA TAACTATGGT
GCTGCTTTTA GCTTTTTGAG TGATCAAGCG GGCTGGCAAC GTTGGTTATT TACAGGTATT
GCTTTTATCG TTACAGGTCT TTTGACTTAC TGGATGAGCA AACTACCAGC GAAAGAGAAA
TGGAATAATA TTGCTTATGC CATGATTATT GGTGGCGCAG TAGGCAATGT ATTCGACCGA
GTAATACATG GGTTTGTCGT AGATTATTTG GACTTTTTCT GGGGTAATTA TCACTGGCCA
GCGTTCAACC TTGCAGACAT GACGATCTGT ATTGGTGCCG CGATGATTAT TCTTGACGGC
TTTCGAAAGA AAGACGAGGC GAAAGCCTAA
 
Protein sequence
MSEKALSLKQ SGIRWLWLAV VIFLADIGIK YVVMNNMGYG WANRIEILPF FNLLYVHNYG 
AAFSFLSDQA GWQRWLFTGI AFIVTGLLTY WMSKLPAKEK WNNIAYAMII GGAVGNVFDR
VIHGFVVDYL DFFWGNYHWP AFNLADMTIC IGAAMIILDG FRKKDEAKA