| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004392 |
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| Symbol | |
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| ID | 8558160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3095043 |
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| End bp | 3097616 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407521 |
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| Product | ClpB protein |
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| Protein accession | YP_003287015 |
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| Protein GI | 262395161 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000934943 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTTG ATCGATTCAC AAGTAAGTTT CAAATCGCTA TCTCTGATGC TCAATCACTA
GCGTTAGGGC GCGATCATCA ATATATCGAG CCAGTTCACC TCATGGTGGC TTTGCTTGAC
CAAAATGGCA GTCCAATTCG TCCATTGCTT ACTATGCTGG ATGTGGACGT AACGCATTTA
CGCTCTAAAT TGAGTGAAAT GCTAGATCGA TTACCAAAAG TCAGTGGCAT CGGTGGAGAT
GTACAGCTCT CTAGTTCGAT GGGCACGTTG TTTAACCTGT GTGACAAAGT GGCGCAAAAG
CGTCAAGACT CCTATATCTC GTCTGAAATC TTCCTGCTTG CTGCTTTAGA AGATCGCGGA
CCATTGGGGC AATTACTCAA AGAGATAGGT TTAACAGAGC AAAAAGTTAG CCAAGCAATC
GAAAAGATCA GAGGTGGTCA AAAGGTTAAT GATCCGAATG CAGAAGAGCT TCGCCAAGCA
TTGGAAAAGT TCACCATTGA CCTTACCGAG CGAGCAGAAC AGGGCAAACT GGATCCGGTT
ATCGGCCGTG ATGATGAAAT TCGCCGTACC ATCCAAGTAT TGCAGCGCCG TACTAAAAAC
AACCCTGTGA TCATCGGTGA ACCTGGCGTA GGTAAGACCG CAATTGTTGA AGGCTTAGCT
CAGCGCATTG TCAACAATGA AGTGCCAGAA GGTTTGCGTG GTCGCCGTGT GCTGTCATTA
GATATGGGCG CACTGGTTGC TGGTGCTAAG TACCGTGGTG AATTTGAAGA GCGCTTGAAG
TCGGTATTGA ATGAACTCGC TAAAGAAGAA GGTAATGTCA TTCTGTTTAT CGACGAGCTC
CATACTATGG TTGGTGCGGG TAAAGGTGAA GGCTCAATGG ATGCGGGGAA CATGCTCAAA
CCTGCATTAG CCCGTGGTGA ACTGCACTGT GTTGGCGCAA CAACACTGGA TGAATATCGT
CAGTACATCG AAAAAGATGC GGCGTTAGAA CGTCGTTTCC AAAAAGTGCT GGTGGATGAG
CCGACCGTTG AGGATACCGT GGCGATTTTA CGTGGCTTGA AGGAGCGTTA TGAGCTTCAT
CATCACGTTG AAATTACTGA CCCAGCGATT GTTGCAGCGG CGAGTTTGTC ACATCGTTAT
GTTTCTGACC GTCAACTGCC AGATAAAGCG ATCGACTTAA TCGACGAAGC GGCTTCAAGC
ATTCGTTTAC AAATTGACTC TAAGCCAGAG TCATTAGATA AGCTTGAACG TAAAATTATC
CAACTTAAGA TTGAGCAACA GGCGCTTAGT AACGAGCACG ACGAAGCGAG TGAAAAGCGT
TTGAAAGCGC TTAATGAAGA ACTCAATGAA AAAGAACGTG AGTACGCTGA ACTAGAAGAG
GTTTGGAATA CAGAAAAAGC CGCACTTTCT GGCACTCAAC ATATTAAGTC TGAGCTTGAA
CAAGCTCGTA TGGACATGGA GTTTGCTCGC CGAGCTGGTG ATTTAAACCG CATGTCGGAA
CTTCAATATG GTCGTATTCC TGAACTTGAG AAGCAGTTAG ATCTTGCAAC CCAAGCGGAA
ATGCAGGAAA TGACACTATT GCGTAATAAA GTAACCGACA ACGAGATTGC AGAAGTACTT
TCTAAGCAAA CTGGCATCCC AGTATCCAAG ATGCTAGAAG CGGAAAAAGA GAAACTACTT
CGTATGGAAG ACGTACTGCA TAATCGTGTG GTAGGGCAAA GCGAAGCAGT CTCTGTTGTA
TCGAATGCCA TTCGTCGTAG TCGAGCTGGG CTTTCTGATC CAAACCGACC AATTGGCTCC
TTCTTATTCT TAGGTCCAAC TGGTGTAGGT AAAACAGAGC TTTGTAAGAC ACTTGCGAGC
TTTATGTTCG ACAGCGAAGA TGCGATGGTC CGTATCGACA TGTCTGAGTT CATGGAGAAA
CACTCAGTGG CAAGATTAGT GGGTGCGCCT CCAGGCTATG TCGGATATGA AGAGGGTGGT
TACTTAACGG AAGCGGTTCG TCGCAAGCCG TATTCGGTAA TTTTGTTAGA TGAAGTAGAG
AAAGCGCATC CGGATGTATT TAACATTCTG CTGCAAGTTC TCGATGATGG GCGTTTAACG
GATGGTCAAG GTCGTACTGT TGACTTCCGT AATACGGTTG TGATCATGAC ATCGAACTTG
GGTTCATCTC GTATCCAAGA GAATTTCGCA ACATTAGACT ATCAAGGTAT CAAGAGTGAA
GTAATGGATG TGGTTAGCAA ACACTTCCGT CCTGAGTTCT TGAACCGTGT TGACGAAATC
GTGGTGTTCC ATCCACTTGG TCAAGAACAC ATCAAGTCCA TCGCTTCTAT TCAATTAGAA
CGTTTGGCGA AACGACTAGA AGAAAAAGGA TATCAACTAG AGGTTTCTGA CAAAGCACTC
GATTTGATCG CTCAAGTTGG TTTCGACCCT GTATATGGTG CGCGTCCTTT AAAACGCGCA
ATTCAACAGA ATGTCGAGAA CCCATTAGCC AAATCGATTC TTTCTGGTGA AATTGTTCCA
GACAAGAAAG TGCAGCTAAT CGTTACTAAT GACCAAATTC GTGCCCATCA GTAA
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| Protein sequence | MRLDRFTSKF QIAISDAQSL ALGRDHQYIE PVHLMVALLD QNGSPIRPLL TMLDVDVTHL
RSKLSEMLDR LPKVSGIGGD VQLSSSMGTL FNLCDKVAQK RQDSYISSEI FLLAALEDRG
PLGQLLKEIG LTEQKVSQAI EKIRGGQKVN DPNAEELRQA LEKFTIDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVIIGEPGV GKTAIVEGLA QRIVNNEVPE GLRGRRVLSL
DMGALVAGAK YRGEFEERLK SVLNELAKEE GNVILFIDEL HTMVGAGKGE GSMDAGNMLK
PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PTVEDTVAIL RGLKERYELH
HHVEITDPAI VAAASLSHRY VSDRQLPDKA IDLIDEAASS IRLQIDSKPE SLDKLERKII
QLKIEQQALS NEHDEASEKR LKALNEELNE KEREYAELEE VWNTEKAALS GTQHIKSELE
QARMDMEFAR RAGDLNRMSE LQYGRIPELE KQLDLATQAE MQEMTLLRNK VTDNEIAEVL
SKQTGIPVSK MLEAEKEKLL RMEDVLHNRV VGQSEAVSVV SNAIRRSRAG LSDPNRPIGS
FLFLGPTGVG KTELCKTLAS FMFDSEDAMV RIDMSEFMEK HSVARLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSSRIQENFA TLDYQGIKSE VMDVVSKHFR PEFLNRVDEI VVFHPLGQEH IKSIASIQLE
RLAKRLEEKG YQLEVSDKAL DLIAQVGFDP VYGARPLKRA IQQNVENPLA KSILSGEIVP
DKKVQLIVTN DQIRAHQ
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