Gene VEA_004368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004368 
Symbol 
ID8558129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3060991 
End bp3062043 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content45% 
IMG OID646407490 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_003286991 
Protein GI262395137 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAT CAGATTTCCA TTTCGACCTT CCAGATGAAC TTATCGCTCG TTACCCTCAG 
CCAGAGCGTA CCGCTAGCCG ACTATTACAA ATGGACGGCA ATACCGGAGA GCTAATTGAT
GGCACATTTA CTGATGTATT GGGCCAAGTT CAACCCGGTG ATCTCGTGGT GTTTAATAAT
ACTCGTGTTA TACCTGCTCG TCTTTTTGGT CGTAAAGAGT CGGGTGGTAA GCTAGAGGTG
CTGGTGGAGC GCATGCTTGA CGAGAAAAGC ATCCTCGCGC ACGTTCGCTG CTCTAAATCT
CCAAAACCAG GTACAACCAT CATTGTTGGC GAGAATGATG AATACTCAGC AGAAATGGTG
GCGCGTCATG ACGCTCTATT TGAACTGAAA TTTAACGCTG ATAAGACGGT ATTAGAAATT
TTGGAAGAAA TCGGCCACAT GCCACTTCCT CCTTACATTG ACCGCCCAGA TGAAGATGCA
GATAAAGAGC GTTACCAAAC CGTATATAAC CAGAAGCCAG GCGCAGTAGC GGCGCCGACA
GCGGGTCTTC ATTTTGATGA TGTTCTACTA GAGAAAATCA AAGCGAAAGG CGCAGAGTTT
GCTTACGTCA CTTTGCACGT TGGGGCAGGT ACATTCCAGC CAGTAAAAGT AGAAAACATC
AACGATCACC ATATGCACGC TGAGTACGTA GAAGTACCGC AAGAAGTCGT CGAAGCAATT
AAAGCGACGA AAGCGCGCGG TGGACGAATT ATTGCTGTTG GTACTACATC GGTACGCTCA
CTTGAAAGCG CAGCGCAAGA CGCATTGAAA AAAGGGACTG AGTTGGCCCC ATTCTTTGGT
GATACAGAAA TCTTTATTTT CCCTGGCTAC GAATATCAGC TTGTGGATTG CTTGATTACC
AATTTCCACC TGCCAGAATC CACACTGATC ATGTTGGTGA GTGCATTTGC AGGTTATGAG
AACACCATGA ATGCTTACAA GCATGCGGTA GAAAACAAAT ATCGCTTTTT CTCATATGGT
GATTCAATGT TCATCAAGAA GAAAACGATT TAG
 
Protein sequence
MQVSDFHFDL PDELIARYPQ PERTASRLLQ MDGNTGELID GTFTDVLGQV QPGDLVVFNN 
TRVIPARLFG RKESGGKLEV LVERMLDEKS ILAHVRCSKS PKPGTTIIVG ENDEYSAEMV
ARHDALFELK FNADKTVLEI LEEIGHMPLP PYIDRPDEDA DKERYQTVYN QKPGAVAAPT
AGLHFDDVLL EKIKAKGAEF AYVTLHVGAG TFQPVKVENI NDHHMHAEYV EVPQEVVEAI
KATKARGGRI IAVGTTSVRS LESAAQDALK KGTELAPFFG DTEIFIFPGY EYQLVDCLIT
NFHLPESTLI MLVSAFAGYE NTMNAYKHAV ENKYRFFSYG DSMFIKKKTI