| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004364 |
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| Symbol | |
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| ID | 8558125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3056356 |
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| End bp | 3057303 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407486 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_003286987 |
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| Protein GI | 262395133 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0679828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCAAA TTCTAAAAGC AGAGAAGACG ATCGGCTTTA TGCGTTGGTC GAAAGTAGCA
TTCGTTTTTT CAATCTTTAT GATTGCTGCT TCTATCTTCA CTTTGTCAAC TAAGTGGCTA
AATTGGGGCC TAGACTTCAC TGGCGGTACG CTAATTGAAG TTGGCTTTGA AAAGCCTGCG
AACCTTGAAA AAATCCGAAC CGCTCTAGAT GCGAAAGGTT TTGGTGATGC GACAGTACAA
AACTTCGGTA GTGCTCGTGA AGTAATGGTT CGTCTTCGTC CACGTGATGA CGTTTCTGGT
GAAACGCTGG GCAACCAAAT CATTGGTGCT ATCAAAGATG GTACTGGCGA AAGCGTAGAA
ATGCGTCGTA TTGAATTCGT AGGTCCTAAC GTTGGTGATG AGCTAACAGA AGCTGGCGGT
CTAGCGATCC TCGTGTCGCT GATCTGTATC CTGCTTTATG TCTCGATGCG ATTTGAATGG
CGTCTAGCGG CTGGTGCGGT TATGGCATTG GCTCACGATA TCATTATCAC GTTAGGTGTT
TTCTCATTCC TACAAATAGA AGTTGACCTA ACCATCGTCG CGGCATTATT AACGGTAGTC
GGTTACTCGC TCAACGATAC CATCGTTGTG TTTGACCGTA TCCGTGAAAA CTTCCGTAAG
ATGCGTAAAG GTGAGCCAGC CGATATCATG GACGCTTCAA TCACCCAAAC GTTGAGCCGT
ACGTTGATTA CCTCGGGTAC AACATTGTTC GTGGTAATTG CACTGTTCAT GCAGGGTGGT
GCGATGATTC ACGGCTTCGC AACCGCACTT CTACTTGGTA TCACTGTAGG TACTTACTCT
TCTATCTACG TAGCATCAGC ACTAGCGCTA AAACTGGGCA TCCAGAAAGA GCACTTGATG
CCACCTCAAG TAGAAAAAGA AGGCGCAGAG TTCGACGAAA TGCCATAA
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| Protein sequence | MFQILKAEKT IGFMRWSKVA FVFSIFMIAA SIFTLSTKWL NWGLDFTGGT LIEVGFEKPA
NLEKIRTALD AKGFGDATVQ NFGSAREVMV RLRPRDDVSG ETLGNQIIGA IKDGTGESVE
MRRIEFVGPN VGDELTEAGG LAILVSLICI LLYVSMRFEW RLAAGAVMAL AHDIIITLGV
FSFLQIEVDL TIVAALLTVV GYSLNDTIVV FDRIRENFRK MRKGEPADIM DASITQTLSR
TLITSGTTLF VVIALFMQGG AMIHGFATAL LLGITVGTYS SIYVASALAL KLGIQKEHLM
PPQVEKEGAE FDEMP
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