Gene VEA_004319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004319 
Symbol 
ID8558080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp3002552 
End bp3003139 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content44% 
IMG OID646407441 
Productmembrane protein 
Protein accessionYP_003286942 
Protein GI262395088 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATGA AGCCTTTGCT CGAGCAATAC GGCTACTTGG CGCTGATTGT CAGTATATTT 
CTAGAAGGGA TAGGTGTACC GATGCCTGGT CAATCGCTGA TGATCGCGGC ATCTTTGCTC 
TCTTCAGAAC AAGTCATGAA CCTAAGTATG GTTATGATGG TATCGTGGCT AAGCTGCTTT 
TTTGGGAATA CCTGTGGTTA CCTAATCGGT TATTACTTTG AAGGCTGGTT GGATAAAAAA 
GGCTATATCT CTGGCCCGAA GATGCAAACA CTTCAACTGA CTATCCAGAA ATACGGCCCT 
ACGTGCTTGG TCGTCAGTCG CTTTATTGAA GGAATGAAGC AATTTATGCC TCTTGCATGC 
GGTATCGCGA AAATGCCACG TAGAGAGTTT TTGCTCGGTA ACGCCCTCGC GGCGACGGTT 
TGGGTATTGG TATTCAGCTT GTTAACTCAC TTTGCATTTG AACATTTAAG CGTGTTGACC 
AACCTGTACA CCGAATACAA ATATCTGGTA TGGGCATTTG CTGCTGTCTT ATTTACGTGG 
ATGGTTTTAG GTATTGTTAA ACGCAAAAAA GCCAAATCAA TGCAATAA
 
Protein sequence
MSMKPLLEQY GYLALIVSIF LEGIGVPMPG QSLMIAASLL SSEQVMNLSM VMMVSWLSCF 
FGNTCGYLIG YYFEGWLDKK GYISGPKMQT LQLTIQKYGP TCLVVSRFIE GMKQFMPLAC 
GIAKMPRREF LLGNALAATV WVLVFSLLTH FAFEHLSVLT NLYTEYKYLV WAFAAVLFTW 
MVLGIVKRKK AKSMQ