| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004277 |
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| Symbol | |
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| ID | 8558038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2956658 |
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| End bp | 2958850 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407399 |
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| Product | TonB-dependent heme receptor |
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| Protein accession | YP_003286900 |
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| Protein GI | 262395046 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAT TAAAAAGTCA TCCATTCAAA GTAAATCTCA TTTCACTAAC TTTGCTCTTC
CCTCTTTATT CATATGCCGA GACAACGCCA AATGAAGAGC TCGAAGTCAT CGGTGTGCGT
TATGCCAAAC CCATCACCGT TGCTGAGCCT GCGCAAACCA CCATTAATTG GTCAGAGATT
GAAGAGCAAC AGTACTCCAA TTTTGCCTCA ATGATCGATG CCGTTCCGGG CGCATCATTA
GATGGCGGCG GCCGTTCCGG CGGCGAACGT ATTAATATTC GTGGTTTTGA TGATCCAAGC
GATATCGCCG TATTTGTCGA TGGCGCTCCA ATTGGCTTTC AACAATACCG CTACGGAACT
TTCTTTTTTG ATCCGTTCTT GATTGGTGAA GCAGAAATTA TCAAGGGCGC GCACGACTAT
CGAGCACTCA ACGGAAAGTT TGGTGGCTCA ATTCGTATTA AAACCAAAAG TGTCGATGAC
CTACTGTACG GCAACAGAAA CTTTGGTGCT CGCATCTCAA GTGCATATAA CACCAACGGC
GATGAGAATG CCTACACGCT AACACTCTAT GGTAAAAACG ATGCTGGTTT TTATTTTCTA
GCGAATGGCT CTGTAAAAGA TTCTGATGAC ATTAAAGTCG GTGGTGGTGA AACGCTGGAT
TACTCAGGTT ATGAGCAAGA AAACATGCTC GTAAAAGTCG GTTATGAAAA CAACGATCAC
GAGTTTGAAA TTAGCCACAC TCGCTATAAA GATGAAGGTC GTAAACCTTG GGCTAACCGC
CGCGGAAAAA TGCCTAACAT TACTGAGTAC AACATCAAGA AATACGGATC ATTAGAAAAA
GCCAAATACG CATACACCGT CGATAATAAA TACACGGATA ACACCACGAC CATCTCTTAC
CACTATATGC CGACTAACCC GTATATTGAT TTCAATATCA AAATGGCACG TTCTGAAAAC
GATCGTCACT GGGTTCGCCC TGACGTGGCA TTCGAGAAAA TGTTCGTTTC TGTTGGCAGT
TACGGTCACG AGTCTTGGCT GAGTTACGAG CGTGACTATG CTGATGTGTT TAACCAAGCG
CAGTTCGGAG AACACACTCT AGTCACAGGG CTTCAATATC AAAAAACAGA TAGAGATTCA
TTAGTATTCA ACGCATCATA CGACAGTAAT GAAGCCAAAA ACTACGGTTG GTATACCCCT
TACTACGAAC CATCTGGCAC TCAGTCAATT TATGCCGCTT ACATTGCTGA TCACTATCAA
GCAACAGACC GCCTAACAAT CACACCTTCT CTGCGTTACG AATACATCAA GAGTGAAGGA
AAAGGGAACA CTGCGCCGGA TTATAATGAT CCAGCTGCCG GACATGACTA CGGTGAAACG
ACGCATAAAG GCTTTAGCCC ACGTTTGGAT ATCGACTTTG ATGCGAGCAA TAATACGCGT
TTAAACGCCT CCTACGCCTA CGCTTTAAAA GCACCAACCG TTGATAACAT CTACTCAGTG
CAATATGCGC GAGCTACCGC TACGGCTACT GCTTTGAATC TGGACGTGTC TCGTATCCAT
GCTTATCAAG CAAGCGTTAT CAACTTAACG GAAGGGCTGG TGAACTCTCG CGATAACCTC
GCAACAGAGT TAACTTTGTT CTATAACGAT GTTAGCGACA CAGTTGATAT ACGAACGGGC
GAAAACCTCG ACAAAAATAC TACTGAGTTA CAAAGCTGGA ATACAAACCT AGATGGCTTT
AAAAACTACG GCTTTGAGCT AATTTCACAA TACCGGATTG AAGATTTCTA CAGTAATTTC
TCAGCAAGTT ACATTCGCGG CAAAAACAAA GGCAGTTTAT CTGACTCTAC AGGTTCAGAT
GATGATCATC CTGATGTACC GCCATTAAAC ATTAATCTGG GTTTAGGTTA CGAATGGATT
CCTGGTTTAC GTACGGGCTG GGAAGTCCGT TGGTATGATG CGCAAACCAA AACCAAAACC
AAGGCAAGCG GTAACAATTT AAAAGTGAAA TCGCCAAGTG AGCAATACAC GCTACAAAAC
GCTTACGTGG TTTGGGAAAT ACAACAAGTC GAAGGCTTGA GCGTTGGCGC GGTTGTGAAA
AACTTAACCG ATCGTTACTA CGAAGCATAC CTATCTAATG GCGTGCCTTC GCCTGGTCGC
GAAGTCAAAC TGCACCTCAC TTATCAATAC TAA
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| Protein sequence | MKRLKSHPFK VNLISLTLLF PLYSYAETTP NEELEVIGVR YAKPITVAEP AQTTINWSEI
EEQQYSNFAS MIDAVPGASL DGGGRSGGER INIRGFDDPS DIAVFVDGAP IGFQQYRYGT
FFFDPFLIGE AEIIKGAHDY RALNGKFGGS IRIKTKSVDD LLYGNRNFGA RISSAYNTNG
DENAYTLTLY GKNDAGFYFL ANGSVKDSDD IKVGGGETLD YSGYEQENML VKVGYENNDH
EFEISHTRYK DEGRKPWANR RGKMPNITEY NIKKYGSLEK AKYAYTVDNK YTDNTTTISY
HYMPTNPYID FNIKMARSEN DRHWVRPDVA FEKMFVSVGS YGHESWLSYE RDYADVFNQA
QFGEHTLVTG LQYQKTDRDS LVFNASYDSN EAKNYGWYTP YYEPSGTQSI YAAYIADHYQ
ATDRLTITPS LRYEYIKSEG KGNTAPDYND PAAGHDYGET THKGFSPRLD IDFDASNNTR
LNASYAYALK APTVDNIYSV QYARATATAT ALNLDVSRIH AYQASVINLT EGLVNSRDNL
ATELTLFYND VSDTVDIRTG ENLDKNTTEL QSWNTNLDGF KNYGFELISQ YRIEDFYSNF
SASYIRGKNK GSLSDSTGSD DDHPDVPPLN INLGLGYEWI PGLRTGWEVR WYDAQTKTKT
KASGNNLKVK SPSEQYTLQN AYVVWEIQQV EGLSVGAVVK NLTDRYYEAY LSNGVPSPGR
EVKLHLTYQY
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