| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004265 |
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| Symbol | |
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| ID | 8558026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2943714 |
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| End bp | 2944841 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646407387 |
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| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_003286888 |
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| Protein GI | 262395034 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000582374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAC ACACTCCTGA AAGAGCGTTT TCTGATTTAG ATTTCGCCAT GATGTCACGA
GCTATTAAGT TAGCGAGACG TGGCATTTAT ACCACCGCCC CAAATCCAAA TGTGGGGTGC
GTCATCGTTC GTGATGAAGA AATTGTTGGT GAGGGCTATC ACCACCGCGC AGGTGAGCCG
CATGCCGAAG TGCACGCGAT GCGCATGGCG GGTGAAAAAG CAGTCGGTGC AACCGCTTAT
GTGACGCTCG AACCTTGCTC TCATTACGGC CGTACACCGC CATGTGCTGA AGGGCTAATC
AAAGCCAAAG TGGCACGTGT GGTTTGCGCA ATGGTAGACC CAAACCCTAA AGTTGCGGGG
CGGGGCATCC AGATGTTGCG TGATGCCGGA ATTGAAGTAC AAATCGGCTT GTTAGAGCAA
GATGCCCTTG CCCTTAACCC TGGTTTTATA AAGTACATGC GTACAGGCAT GCCGTTTGTT
CAATTAAAAA TGGCAGCCAG TTTGGATGGG CAAAGCGCAC TCAGCAATGG GCAGAGCCAA
TGGATCACCT CCCCAGTGGC CCGCCAAGAT GTGCAGCGTT ATCGAGCGAT GAGTGGTGGT
ATTCTCTCTA CCAGCAAAAC GGTGATTGAT GATAATGCGT CACTCAATGT GCGTTGGGAT
GACTTACCTA CCAGTGTTCA AGCGCAGTAT TTACGAGAAG AACTTCGTCA ACCAGTACGT
GTAATCTTAG ACCGTCAGAA CCATTTAACG GATGCGCTCA AGCTGTTCCA CACCGATGGA
GAGCGAGTTA TTGTTAGCCC AGATGGAGAC TGTATCCCTC TATTGGACAG CGCTGACCAA
ATTGACTTAT CAACGACATT AAAACGTATC TCGGATGAGC ACCACATCAA TCACTTATGG
GTTGAAGCTG GAGCTACGCT AGCGAGTGCG ATGATAAAGG CTAACCTTGT AGATGAGCTC
ATTGTTTACC TTGCGCCAAA ACTCATGGGC AGCGATGGTC GGGGGCTTAT CGGTGCTTTA
GGGTTAAGCG CTATGGCTGA CGTCATAGAT TTAAACATTA CAGACGTTCG TATGGTTGGG
GTAGACATTC GCATCACCGC CACCATAAAA CGTAATGAAC TTAGATAA
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| Protein sequence | MTQHTPERAF SDLDFAMMSR AIKLARRGIY TTAPNPNVGC VIVRDEEIVG EGYHHRAGEP
HAEVHAMRMA GEKAVGATAY VTLEPCSHYG RTPPCAEGLI KAKVARVVCA MVDPNPKVAG
RGIQMLRDAG IEVQIGLLEQ DALALNPGFI KYMRTGMPFV QLKMAASLDG QSALSNGQSQ
WITSPVARQD VQRYRAMSGG ILSTSKTVID DNASLNVRWD DLPTSVQAQY LREELRQPVR
VILDRQNHLT DALKLFHTDG ERVIVSPDGD CIPLLDSADQ IDLSTTLKRI SDEHHINHLW
VEAGATLASA MIKANLVDEL IVYLAPKLMG SDGRGLIGAL GLSAMADVID LNITDVRMVG
VDIRITATIK RNELR
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