Gene VEA_004264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004264 
Symbol 
ID8558025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2943052 
End bp2943705 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID646407386 
Productriboflavin synthase alpha chain 
Protein accessionYP_003286887 
Protein GI262395033 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000121594 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACAG GAATAGTAGA AGCAGTTGGC AAGTTAGCTG CGATTACGCC GAAGGGCGAA 
GACATCACCG TCACGATTGA AACGGGTACG CTTGATATGT CAGACGTTAA GTTAGGCGAT 
AGCATTGCGA CCAATGGTGT TTGCTTAACG GTAGTTGACT TCGGAAGCCA CTATTACAGT 
GCTGATCTGT CATTAGAAAC CTTGAAGAAA ACTGGGTTTG CCGAATACCA AGTGGGCGAT 
AAGGTGAATC TAGAAAAAGC CATGTTACCA ACAACGCGAT TGGGTGGACA TATCGTTTCT 
GGCCATGTCG ATGGGGTTGG TGAAATTGTC GAACGCAATT TAGTTGGCCG TGCGATAGAG 
TTTTGGGTTG CAATGCCTGC GGAAATTAGC AAGTACGTCG CAGAGAAAGG CTCGATTACA 
GTTGATGGTA TTAGCCTAAC CGTCAACGAC TTACGTAAAA ATGCTTTTAA GCTGACGATC 
GTTCCTCATA CGAGTGAAGA AACTACGATT GACCAGTTTC AAGTGGGGCG CAAAGTCAAC 
TTAGAAGTTG ATGTACTTGC GCGTTATATG GAGCGTTTAC TGCAAGGACA GCAAGAAGAT 
AAGGCCGAGT CTCGTATCAC GATGGACTTT TTACAGCAAA ACGGTTTTGC ATAA
 
Protein sequence
MFTGIVEAVG KLAAITPKGE DITVTIETGT LDMSDVKLGD SIATNGVCLT VVDFGSHYYS 
ADLSLETLKK TGFAEYQVGD KVNLEKAMLP TTRLGGHIVS GHVDGVGEIV ERNLVGRAIE 
FWVAMPAEIS KYVAEKGSIT VDGISLTVND LRKNAFKLTI VPHTSEETTI DQFQVGRKVN 
LEVDVLARYM ERLLQGQQED KAESRITMDF LQQNGFA