Gene VEA_004263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004263 
Symbol 
ID8558024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2941769 
End bp2942878 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content49% 
IMG OID646407385 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 
Protein accessionYP_003286886 
Protein GI262395032 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000943386 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATCA GTACGCCACA AGAAATTATT GATGATATTC GCGCAGGCAA AATGGTCATC 
CTAATGGATG ATGAAGACCG CGAGAATGAA GGTGACTTGA TCATGGCTGC CGAGCATATT 
ACGCCGGAAG CCATCAACTT TATGGCAACC TATGGCCGTG GCCTGATTTG TTTAACCATG 
ACCAAAGATC GTTGCGAAAG CCTAGGTCTG CCACCAATGG TGCAAGACAA TAATGCGCAA 
TACACAACCA ACTTTACTGT TTCGATTGAG GCAGCAGAAG GGGTAACGAC GGGTATTTCA 
GCCGCGGATC GCGCACGTAC GGTTCAAGCG GCAGTCGCGC CAAATGCCAA AGCTGCGGAT 
TTGGTGCAGC CTGGTCACAT CTTCCCTCTC GCAGCTCAAG ACGGCGGTGT ACTGACTCGC 
GCAGGTCACA CTGAAGCTGG CTGTGATTTG GCTCGCCTTG CTGGTTTAGA GCCTGCATCG 
GTTATTGTTG AGATCTTAAA TGACGATGGC ACTATGGCTC GTCGCCCTGA TCTAGAGATC 
TTCGCAGAGA AGCACGGTAT TAAATTGGGC ACTATTGCCG ACCTAATTGA GTACCGCAAT 
AACACTGAGA CAACGATTGA ACGTGTGGCA GAGTGCAAGT TACCGACAGA GTTTGGCGAG 
TTCACGTTAG TCACGTACAA GGACACCATT GATAACCAAG TGCATTACGC AATGTGCAAG 
GGCGATTTGA AAGAAAAAGC GCCATTGGTT CGCGTTCACC TCCAAGATGT CTTTACTGAT 
TTATTACGTA GCGATCGCAA CGCAGAGCGC AGTTGGACAT TAGACAAGGC AATGAAACGC 
ATTGGTGAAG AAGGTGGTGT GCTGGTTGTT CTTGGCCATG AAGAGTCGAC CGATCTACTT 
ATTCATCGTG TGAAGATGTT TGAAGCGCAA GACAAAGGTG AAGCACCAAC GCTTGCTAAG 
AAACAGGGCA CGTCTCGCCG TGTTGGTGTG GGCTCACAGA TTCTTGCGGA TCTCGGTGTA 
CATGATATGC GCCTTCTGTC ATCGACCAAC AAAAAGTACC ACGCATTAGG TGGTTTTGGT 
CTGAACGTGG TTGAGTACGT CTGCGAGTAA
 
Protein sequence
MPISTPQEII DDIRAGKMVI LMDDEDRENE GDLIMAAEHI TPEAINFMAT YGRGLICLTM 
TKDRCESLGL PPMVQDNNAQ YTTNFTVSIE AAEGVTTGIS AADRARTVQA AVAPNAKAAD 
LVQPGHIFPL AAQDGGVLTR AGHTEAGCDL ARLAGLEPAS VIVEILNDDG TMARRPDLEI 
FAEKHGIKLG TIADLIEYRN NTETTIERVA ECKLPTEFGE FTLVTYKDTI DNQVHYAMCK 
GDLKEKAPLV RVHLQDVFTD LLRSDRNAER SWTLDKAMKR IGEEGGVLVV LGHEESTDLL 
IHRVKMFEAQ DKGEAPTLAK KQGTSRRVGV GSQILADLGV HDMRLLSSTN KKYHALGGFG 
LNVVEYVCE