Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004261 |
Symbol | |
ID | 8558022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2940662 |
End bp | 2941129 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407383 |
Product | transcription termination protein NusB |
Protein accession | YP_003286884 |
Protein GI | 262395030 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00012061 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGCCA GTGTGAAACC AGCCGCACGT CGTAACGCAC GTCAATTCGC TCTACAGGCG ATCTACTCAT GGCAAATTAC TAAAGAGAAT GTTGCCAAGA TTGAAGAACA GTTTTTGTCT GGCGACAAAT ACGATGAAGA AGAACTTCAT GCATCTGAGC CAGCGCTTGC TGCTCCAGAA ACAGACGTAG CTTACTTCCG TGAACTACTA AGCGGTGTTG TACTTAGCCA CGCTGAGCTA GATAGCAAAA TTCGTCCATA CATCTCTCGT CCTATGCAGG ATTTAGATAT GATGGAACTT GCTCTTCTTC GCCTTGCTAT GTACGAGATG ACTCGTCGCG AAGATGTTCC TTACAAAGTT GTTATCAATG AAGCGATTGA ACTTGCAAAA GTCTTCGCAG CAGAAGATAG CCACAAGTTT GTGAACGGTG TACTTGATAA AGCAGCACCT CACATTCGTA AGAAATAG
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Protein sequence | MGASVKPAAR RNARQFALQA IYSWQITKEN VAKIEEQFLS GDKYDEEELH ASEPALAAPE TDVAYFRELL SGVVLSHAEL DSKIRPYISR PMQDLDMMEL ALLRLAMYEM TRREDVPYKV VINEAIELAK VFAAEDSHKF VNGVLDKAAP HIRKK
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