Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004237 |
Symbol | |
ID | 8557998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2916224 |
End bp | 2916775 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646407359 |
Product | D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase |
Protein accession | YP_003286860 |
Protein GI | 262395006 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase [TIGR01656] histidinol-phosphate phosphatase family domain [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAAAAC CTGCTGTTTT TATCGATCGT GATGGCGTGA TAAACGTTGA CCACGGCTAC GTTCATGACG AACATGATTT TGAGTACATT GATGGTGTGT TTGAAGCGAC GAAAGCGCTG AAAGATCAAG GTTACCTCTT AGTGCTAGTG ACGAATCAAT CGGGCATCGC ACGTGGTAAA TTCAGTGAAG ACCGTTTCTT GTCTCTGACT CAATGGATGG ACTGGAACTT TGTTGATCAT GGTGTTGAGT TTGATGGTAT CTACTACTGT CCACATCACC CTGAACATGG CATTGGGGAT TACAAGCAGG ATTGTGATTG CCGCAAGCCT AAGCCTGGTA TGTTTATCTC TGCTCGCGAC TTCTTGAAAA TCGACATGGA AAAATCTGTG ATGATTGGTG ATAAAGCCGA AGACATGATG GCAGCAGAAG CCGCAGGCGT TGGCACCAAG ATTTTGGTTC GCACAGGTAA GCCAATCACC GAGCAAGGTG AAGCATTGGC AACGGTTGTG CTTGATAGTG TTGCTGACGT GCCTGCATAT CTAAAGAAAT AA
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Protein sequence | MAKPAVFIDR DGVINVDHGY VHDEHDFEYI DGVFEATKAL KDQGYLLVLV TNQSGIARGK FSEDRFLSLT QWMDWNFVDH GVEFDGIYYC PHHPEHGIGD YKQDCDCRKP KPGMFISARD FLKIDMEKSV MIGDKAEDMM AAEAAGVGTK ILVRTGKPIT EQGEALATVV LDSVADVPAY LKK
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