Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004230 |
Symbol | |
ID | 8557991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2906853 |
End bp | 2908103 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646407352 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003286853 |
Protein GI | 262394999 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000024605 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAGC GTGATATGAA CATCGCAGAT TACGATGCGG AACTGTTCGC AGCTATCCAG GAAGAAACTC TTCGCCAGGA AGAACACATT GAACTTATCG CTTCTGAAAA CTACACAAGC CCACGTGTAA TGGAAGCGCA AGGTTCTCAG CTAACGAACA AATACGCTGA AGGCTACCCA GGCAAGCGTT ACTACGGCGG TTGTGAGTAC GTAGATAAAG CGGAACAACT TGCTATCGAC CGTGCATGCA AACTGTTCGG TTGTGAATAC GCGAACGTAC AGCCTCACTC AGGTTCTCAA GCAAACAGCG CAGTTTACAT GGCGCTTCTT AACCCAGGCG ATACAGTTCT AGGCATGAGC CTAGCGCACG GTGGTCACCT GACTCACGGT TCTCCAGTTA ACTTCTCTGG TAAGCACTAC AACGTTATCC CTTACGGTAT CGATGAAGCG GGTCAAATTA ACTACGACGA GATGGAACAG CTAGCGCTTG AGCACAAGCC TAAGATGATC ATCGGTGGTT TCTCTGCTTA CTCGCAAATC GTTGATTGGA AGCGCATGCG TGAAATCGCT GACAAAGTAG ATGCTTACCT TTTCGTTGAT ATGGCGCACG TAGCGGGTCT TATCGCAGCA GGCGAATACC CAACACCTGT TCCACACGCT CACGTGGTAA CAACAACGAC GCACAAAACA CTAGCAGGTC CTCGCGGTGG TCTTATCTTG TCAAATGCTG GCGAAGATAT GTACAAGAAA TTGAACTCAG CAGTGTTCCC TGGTGGTCAA GGTGGCCCTC TAATGCACGT TATCGCTGGT AAAGCAGTAG CGTTCAAAGA AGCGATGGAG CCAGAGTTCA AAGCTTACCA AGCTCGCGTA GTGAAAAACG CAAAAGCAAT GGTTGGTCAA TTCCAAGAGC GTGGCTACAA AATCGTATCT AACGGCACAG AAAACCATTT GTTCCTTGTG GATCTGATCG ACAAAGACAT CACTGGTAAA GACGCAGACG CGGCACTAGG TGCAGCAAAC ATCACAGTGA ACAAAAACTC GGTACCAAAT GACCCACGCA GCCCATTCGT AACGTCTGGT ATCCGTGTAG GTACGCCAGC GATCACTCGC CGTGGCTTCA CTGAAGAAGA TGCAAAAGAG CTAGCAAACT GGATGTGTGA CGTTCTAGAT AACATCGGCA ACGAAGAAGT TATCGAAGCG ACTAAACAGA AAGTGCTCGA AATTTGTAAG CGTCTACCGG TTTACGCCTA A
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Protein sequence | MLKRDMNIAD YDAELFAAIQ EETLRQEEHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP GKRYYGGCEY VDKAEQLAID RACKLFGCEY ANVQPHSGSQ ANSAVYMALL NPGDTVLGMS LAHGGHLTHG SPVNFSGKHY NVIPYGIDEA GQINYDEMEQ LALEHKPKMI IGGFSAYSQI VDWKRMREIA DKVDAYLFVD MAHVAGLIAA GEYPTPVPHA HVVTTTTHKT LAGPRGGLIL SNAGEDMYKK LNSAVFPGGQ GGPLMHVIAG KAVAFKEAME PEFKAYQARV VKNAKAMVGQ FQERGYKIVS NGTENHLFLV DLIDKDITGK DADAALGAAN ITVNKNSVPN DPRSPFVTSG IRVGTPAITR RGFTEEDAKE LANWMCDVLD NIGNEEVIEA TKQKVLEICK RLPVYA
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