Gene VEA_004213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004213 
Symbol 
ID8557974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp2890143 
End bp2890607 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content44% 
IMG OID646407335 
Productpredicted metal-dependent hydrolase 
Protein accessionYP_003286836 
Protein GI262394982 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.522311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTG AACTTGATCT GCAACTGGCA GTCGAAAATG AAGAAGGGCT GCCTTCGCAG 
CAAGATTTCC AATTGTGGCT AGATAAGACG ATTCCTCTCT TCCAGCCACA AGCCGAAGTG 
ACCATTCGCA TTGTTGATGA ACAAGAAAGT CACACGCTTA ACCATGAGTA TCGTGGTAAA 
GATAAACCGA CTAATGTGCT GTCTTTTCCA TTTGAAGCTC CTCCAGGTAT GGAAATAGAT 
TTACTTGGCG ACTTAATTAT TTGCCGCCAA GTCGTTGAAA AAGAGGCAAT TGAACAGAAC 
AAGCCTCTGT TAGCACATTG GGCGCATATG GTTGTACATG GCAGCTTGCA TCTGCTAGGT 
TATGATCATA TTGAGGATGA CGAAGCCGAA GAGATGGAGT CCCTCGAAAC CGAAATCATG 
CAAGGTATGG GCTATGAAGA CCCTTACATT GCTGAAAAAG AGTAG
 
Protein sequence
MAIELDLQLA VENEEGLPSQ QDFQLWLDKT IPLFQPQAEV TIRIVDEQES HTLNHEYRGK 
DKPTNVLSFP FEAPPGMEID LLGDLIICRQ VVEKEAIEQN KPLLAHWAHM VVHGSLHLLG 
YDHIEDDEAE EMESLETEIM QGMGYEDPYI AEKE