Gene VEA_004171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004171 
Symbol 
ID8557910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2844754 
End bp2845464 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID646407271 
Productflagellar basal-body rod modification protein FlgD 
Protein accessionYP_003286794 
Protein GI262394940 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGAA TTAACAACGT TGGTCAAAGC GGCTTGTCCT ATATCGACCA GCTTAAAAGT 
CTACAAGAGA GCAACAAGAA GACGGAAGAG AGCACGGGTA AGCAAGACCT AAAACAGGAA 
GACTTCTTAT CATTGCTCAC GAAGCAATTG TCTCAACAGG ACCCTTTTAA GCCGGTAAGT 
AATGACCAGA TGATTGCGCA AATGGCTTCA TTTGCGACCG TTGATGGCAT TGGCAAGATG 
AACACTCAGT TTGAGAGTTT GAACTCGTCA ATGACATCAA ACCAAGCGTT ACAAGCTTCC 
TCTTTGGTAG GGCGTGACGT ATTGGTCCCA GGAGCGGCAG GTGTGAAGCA GGACGACGCG 
CCAATGGCGG CAATGGTTAA GCTTTCACAA TCTATCGATA ATCTGTTTGT TCGTGTAGAG 
GATGAAGCTG GCCAACTGGT TCGTACTTTT GAGGTAGGGG CGAAACCAGC CGGCGACACG 
CGTGTGCTTT GGGACGGTAA AGATGAAAGC GGAAATCCAC TGCCTGCTGG CAAATACAAA 
GTGAAAGCGT CTGGCTTAGT TGAGGGGGAG TCGCAAGAGT TCCCAGTATC GACATACGCC 
AACGTAAACA GCGTATTGCT CGGCAAAGGT GACGGAAACG TATTACTCAA TCTGGCTGGT 
TTTGAATCGC CAGTTCGACT TGCAGAAGTT TTGGAAGTCG GCAAAGCGTA G
 
Protein sequence
MAGINNVGQS GLSYIDQLKS LQESNKKTEE STGKQDLKQE DFLSLLTKQL SQQDPFKPVS 
NDQMIAQMAS FATVDGIGKM NTQFESLNSS MTSNQALQAS SLVGRDVLVP GAAGVKQDDA 
PMAAMVKLSQ SIDNLFVRVE DEAGQLVRTF EVGAKPAGDT RVLWDGKDES GNPLPAGKYK 
VKASGLVEGE SQEFPVSTYA NVNSVLLGKG DGNVLLNLAG FESPVRLAEV LEVGKA