Gene VEA_004160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004160 
Symbol 
ID8557899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2830907 
End bp2832031 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content47% 
IMG OID646407260 
Productflagellin protein flaE 
Protein accessionYP_003286783 
Protein GI262394929 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000739786 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCTT TAAATACCAA TGTTGCCGCG ATGGTGGCGC AGAGACACCT GAGTCAAGCG 
GCAGCGCAAA ACGTCGAGTC ACAACGGAAC CTCACTTCTG GTTTTCGAAT TAACTCGGCG
AGTGATGATG CGGCAGGTTT ACAGATATCC AATACTCTCC ATGTACAAAC GAGAGGGCTT
GATGTCGCCT TAAGAAATGC GCACGATGCT TATTCGGTCG CGCAAACCGC GGAAGGCGCG
TTACATGAGA GCAGTGATAT TTTGCAACGG TTACGCTCTC TAGGGCTTCA AGCGGCAAAT
GGTAGTAACG ATACCAGTGA CCGACAAAGC ATCCAATACG AGGTCGTAGC GCTGCAGGAT
GAGCTTGATC GTGTCGCGAT CACAACGACA TTTGCGGATA AAAATTTATT TGATGGTTCT
TATGGCTCGC AAAGCTTTCA TATTGGCGCG AACGCTAACT CAATCTCTTT GACGTTACGT
AATATGCGTA GCCATATCCC AGAGATGGGA GGGCTGCATT ATGTTGGTGA TGCGGTCGAT
AAAGATTGGC GAGTCACTAA AGATAACCAA ACTCTAAAAG TCGAATACCA AGACAGTAAA
GGGCAAACCC AAACGGAATC CATTGGGCTC AAATTGGGTG ATCGCGTAGA ACAGGTCGCC
ACTTACATCA ATGCTCAACA ATCGGTAGTG AGTGCCTCAG TAACGGAAAA CAATGAACTG
CAATTCTTTG CCTCTACGAT CAAGGCGCCA GAGGGCGTGG TTCTCGATGG GAGTTTAGCG
GATGAGCTTG ATATAAGCAC TGGTCAATTA GTCACAATGG ATGACATCGA TATGTCGACG
GCTGGTAAGG CGCAGCTTTC AATAGGGGTG ATTGATGCAG CGATCAAGTA CGTTGATTCG
CACCGAAGTG AAATTGGCAG CTTTCAGAAT CGTGTAAATG GTTCGGTGGA TAACTTAAAT
ACCGTGAATC GGAGTGTTAC GGAATCCAAG AGTCGAATAA GAGACACGGA TTTTGCAAGA
GAGTCTACGG AAATGGTGCG TTCTCAAGTG CTCCAAGATG CGACAACTGC GTTATTGGCT
CAGGCAAAAC AAAGGCCGAG TTCGGCACTT GGTCTACTCA GTTGA
 
Protein sequence
MVSLNTNVAA MVAQRHLSQA AAQNVESQRN LTSGFRINSA SDDAAGLQIS NTLHVQTRGL 
DVALRNAHDA YSVAQTAEGA LHESSDILQR LRSLGLQAAN GSNDTSDRQS IQYEVVALQD
ELDRVAITTT FADKNLFDGS YGSQSFHIGA NANSISLTLR NMRSHIPEMG GLHYVGDAVD
KDWRVTKDNQ TLKVEYQDSK GQTQTESIGL KLGDRVEQVA TYINAQQSVV SASVTENNEL
QFFASTIKAP EGVVLDGSLA DELDISTGQL VTMDDIDMST AGKAQLSIGV IDAAIKYVDS
HRSEIGSFQN RVNGSVDNLN TVNRSVTESK SRIRDTDFAR ESTEMVRSQV LQDATTALLA
QAKQRPSSAL GLLS