Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004117 |
Symbol | |
ID | 8557857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2783797 |
End bp | 2785086 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646407219 |
Product | citrate synthase (si) |
Protein accession | YP_003286742 |
Protein GI | 262394888 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGATA AGAAAGCGAC CCTTCATGTT GAAGGTCAAG CGCCAATCGA ACTGCCAATT ATGGACGGTA CGCTAGGTAC ACCTGTAATT GACGTTCGTA AGCTGGGAGC CAATGGTTAC TTTACTTTTG ACCCAGGTTT TCTTGCCACT GCATCTTGTG AATCATCAAT CACGTACATC GATGGCGGCA AAGGTATTCT TTTGCACCGC GGTTTCCCGA TTGATCAATT AGCCAATAAC GCAGATTACT TAGAAGTATG TTACATCCTT CTTTATGGTG AAGCCCCTAC CCGAGAACAA TACGAGCAAT TCAAGACGAC CGTAACGCGT CATACTATGG TCCACGAACA AATCGCAAGC TTTTTCCATG GCTTCCGACG TGATGCTCAC CCAATGGCAG TAATGTGTGG TGTAGTCGGT GCACTTGCAG CCTTCTACCA CGACTCTCTT GACATCAACA ACGACGAGCA CCGCGAGATC GCGGCGTACC GTCTGCTATC GAAGATGCCG ACACTGGCTG CAATGTGTTA CAAATACTCT ATCGGTCAGC CATTTATCTA CCCACGCAAC GATTTGAGCT ACGCAGAAAA CTTCCTACAC ATGATGTTCG CAAACCCTTG CGAAGAGTAT GAAGTAAACC CTGTCGTTGC TCGTGCAATG GATAAAATCT TCACGCTACA CGCGGATCAT GAACAGAATG CGTCGACGTC AACTGTACGT CTAGCTGGCT CTTCTGGTGC TAACCCATTT GCATGTATTG CCGCTGGTAT TGCATCACTT TGGGGACCTG CTCACGGTGG TGCAAACGAA GCGTGCTTGA GAATGTTAGA AGAGATTGGC AGCGTCGATA ACATCCCTGA GTATGTAGAC CGCGCGAAAG ACAAAGATGA CCCATTCCGC TTAATGGGCT TTGGTCACCG CGTTTATAAA AACTACGATC CACGTGCGAC AGTAATGCGC GAAACGTGTC ATGAAGTTCT CAAAGAGCTA AACATTCAAG ACCCTCTACT AGATGTAGCA ATGGAACTTG AGCGCATTGC GCTTTCTGAT GAGTACTTCG TTTCTAAGAA GCTGTACCCG AACGTAGACT TCTACTCAGG TATCATTCTT AAAGCGATTG GTATTCCAGT TTCTATGTTT ACGGTTATCT TCGCGATTTC TCGTACCATC GGCTGGATTG CTCACTGGAA CGAAATGCAC AGCGATCCAC TGAACCGCAT CGGTCGTCCT CGTCAGCTAT ACACTGGTGA GACACAGCGT GAGTTTTCTC CACTTCACGA ACGTGAATGA
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Protein sequence | MADKKATLHV EGQAPIELPI MDGTLGTPVI DVRKLGANGY FTFDPGFLAT ASCESSITYI DGGKGILLHR GFPIDQLANN ADYLEVCYIL LYGEAPTREQ YEQFKTTVTR HTMVHEQIAS FFHGFRRDAH PMAVMCGVVG ALAAFYHDSL DINNDEHREI AAYRLLSKMP TLAAMCYKYS IGQPFIYPRN DLSYAENFLH MMFANPCEEY EVNPVVARAM DKIFTLHADH EQNASTSTVR LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLRMLEEIG SVDNIPEYVD RAKDKDDPFR LMGFGHRVYK NYDPRATVMR ETCHEVLKEL NIQDPLLDVA MELERIALSD EYFVSKKLYP NVDFYSGIIL KAIGIPVSMF TVIFAISRTI GWIAHWNEMH SDPLNRIGRP RQLYTGETQR EFSPLHERE
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