Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004067 |
Symbol | |
ID | 8557806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2728340 |
End bp | 2729740 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407168 |
Product | putative surfactin synthetase |
Protein accession | YP_003286692 |
Protein GI | 262394838 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATACAA CGTATTCGAG CTTTACCTCC CTAGCGACCT TGTTCGTCGC AGAGAGGCCT GAGCAATCCC CTGTCTCTTA CGATCGCGAC ACAGTTATCA CTTGGGGTGA TTTCCAGCAG CACGTCGCAA CGCTTGCTCA GCAGTTAGAA ACCCAACCAA CGCAAAACAT TGCGTTGTGT TTTGGCAACA GCTACCTGTT TGCCGTTGGC TTTTTCGCTT GTTGTTATGC AGGAAAATCC ATTGTATTAC CTGGTAATTA CCAACCAGAA GCACTCAAAG AGCTCAGTGA TCACTACGAT TTGTTGCTGC ATGATGCCGA TGTCTCGGTT CCAGAACTGT TGAGCTCGCT TTTGATCGAA GCTCAATCAT TGCTAGAAAT CACTGTGATT AACGAGCCAA AAGCCAAACA ACCTTATGTT TGGCGTGAAT TGAATCTGGC ACAAATACCA GTGACGCTAT TCACTTCTGG TTCAAGCGGC AAACCAAAAG CCATTGCAAA AACGCTGAAA CAGCTCGATA TCGAAGTGTC TATTCTAGAC AACCTATGGG GCGACACGGT TGCCAACACA CGCGTTGAAA GCACCGTCTC TCATCAACAC ATTTACGGCT TGCTGTTTCG CGTATTGTGG CCTTTGTGCT CTGCACGTCC ATTTTCAGCA CACAACCTCG AGTTCCCTGA GCAAATTGTC CATCACGCCG ATGCTGACAC CACGCTAGTA AGCAGCCCTG CGTTACTAAA ACGACTCAGT GAAGAGCACA ATCCGGTTGC GATTCGGTGC GTATTTTCTT CTGGTGGCCC CTTGCCAAAC CAAGCGGCGC AGCACAGCCA GCAGTTGTTT GGGTCACTTC CTATTGAAGT TTTTGGCAGC ACAGAAACCG GCGGCATCGC TCACCGTCAG CAGCACGTAG CTAGCACTCC CTGGACGTTA TTCCCTGGCA TTGAAGCAAA GCTTAACCAT GAAAATTGTT TAAAGCTCCG CTCGCCACAC ATTGATGAAA ACACTTGGTA CCAAACTGCG GATGAATGCT ATTTCCATGA TAGTATTTCT TTTGAATTGC GTGGACGCAC TGACCGAATC GTCAAAGTCG AAGAAAAGCG TATTTCCCTT GTCGAAGTGG AAAAACGTTT AGAGCAATTG CCGTGGATTC AAGAAAGCGT GGTGATCCCA ATGGAAGAAT CTGGTCGCCT CACGTTAGTC TCAATCATCG TACTTAACGA TCAAGGCAGC GATGTGCTTA ATGAACTTGG TAAAGGCAAA TTTTGGCTTG AGCTTCGCAA GGCACTGCGC AATTGGCTAG AACCGATCGC TATCCCGAGA AAATTCCGAG TGGTCGACGA AATTCCATTG AACAGCCAAG GCAAACGCCA AGTTGCTGAA ATTGAAAAAC TATTCCAATA A
|
Protein sequence | MNTTYSSFTS LATLFVAERP EQSPVSYDRD TVITWGDFQQ HVATLAQQLE TQPTQNIALC FGNSYLFAVG FFACCYAGKS IVLPGNYQPE ALKELSDHYD LLLHDADVSV PELLSSLLIE AQSLLEITVI NEPKAKQPYV WRELNLAQIP VTLFTSGSSG KPKAIAKTLK QLDIEVSILD NLWGDTVANT RVESTVSHQH IYGLLFRVLW PLCSARPFSA HNLEFPEQIV HHADADTTLV SSPALLKRLS EEHNPVAIRC VFSSGGPLPN QAAQHSQQLF GSLPIEVFGS TETGGIAHRQ QHVASTPWTL FPGIEAKLNH ENCLKLRSPH IDENTWYQTA DECYFHDSIS FELRGRTDRI VKVEEKRISL VEVEKRLEQL PWIQESVVIP MEESGRLTLV SIIVLNDQGS DVLNELGKGK FWLELRKALR NWLEPIAIPR KFRVVDEIPL NSQGKRQVAE IEKLFQ
|
| |