Gene VEA_004025 details

Gene Information

• Locus tag: VEA_004025
• ID: 8557764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2679646
• End bp: 2681520
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646407126
• Product: hypothetical protein
• Protein accession: YP_003286650
• Protein GI: 262394796
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
• TIGRFAM ID: [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0141461
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGTCCG ACAGACAGCC GTCCTTACTT ACGCAAAGAA AGTTCCTACC CTATTTCATT 
ACTCAGTTTT TTGGCGCTTT CAACGACAAT ATTTTTAAAA ACGTTTTGCT GCTGTTTGTC 
GCCTTCGCGG GATCCAGCGC ACTACCTATT TCGAGCAACT TGTTCATCAA TTTAGCGGCT 
GGCTTGTTCA TTCTACCGTT CTTTCTATTC TCCGCTTCAG CTGGCGTATT AGCCGATAAA 
TATGAAAAAT CATGGTTTAT TCGCAAGGTA AAGCTGTTTG AAATCGCCAT CATGCTTTTG 
GGCGCCATTG GTTTTATAAC CGAAAGTTAT GGTGTGCTTT TGCTGCTACT GTTCTTAATG 
GGCACACAGT CAGCGTTCTT TGGACCGGTT AAATATGCCC TTTTGCCCCA AAAATTAAAC 
GCGAAAGAGT TAGTGCCAGG CAACGCCCTT GTTGAAGCTG GTACCTTTAT CGCCATCCTT 
ATTGGTACCC TAGGTGCTGG AATTATCGCC TCAGCAGACA ACGCAAAATA CCTTGCCGCA 
TTTTGTGTCG TACTCTTTGC ATTGTTGGGA TATTTGTCGA GCCGCTCAAT ACCCTTTGCA 
GCCGCCAGCG CACCTAACCT TTCTTTTCGT TGGCAACCGT ATAAACAAAC TAAACACACG 
CTATCCATCG CAAAATCAGA TCGTGTTGTT TTTCAATGCA TTATGGCGAT AAGCTGGTTC 
TGGTTTTTAG GCGCCGCCTA TCTAACCCAG TTCCCAAATT TCACCAAGAT TTACTTAAAT 
GGCACCGAGA GTGCGGTGTC TTTCTTACTT GCTCTGTTTT CTATTGGTAT CGCGCTAGGG 
TCGCTTCTTT GCAATTGGAT CTCGAATCAT CGTATCGAAG TCGGTATTGT GCCTATTGGC 
GCACTTGGCA TTACGGTATT TGGGTACTTG ATGGCAACCT CCATTCCAAG TGACCTACCT 
ATCTTCCATA ACTTTGTAGA CTTCTTTAGA TATGAGCCTT TTTGGCCATT ATTTTTCTAT 
CTATTGATGA TTGGCGCCTC TGGCGGGCTG TTTATCGTAC CGCTTTACGC ATTAATGCAA 
CATAGAGCAA AGGAAACCGA GCGCGCACAA GTCATCGCAG GGCTCAACAT CTTTAACTCT 
CTGTTTATGG TCGGCAGTGC TGTCTTAGGT ATTGTGTGCC TGAGTATCAT CAAGATGACA 
ATTCCTCAGC TGTTTGCATT GTTAGCCATT TTGAATTTCT TGGTCGCCGC TTACATTTTT 
TTGCAAATAC CGATATTCGT TGTCCGTTTT GTGGTTTGGA TGCTAACTCA CACTATTTAT 
CGAGTGAAAC ATAAAAACCT ACATAACTTG CCAGAACAAG GCGGTGCGTT GATCGTATGT 
AATCACGTGA GCTATATGGA CGCCTTGCTA CTTAGCGCAG TATGCCCAAG GTTGATTCGT 
TTTGTGATGG AGGAAGATTA CGCCAACCTA CCTCCACTAA GACGCTTTTT ACGCAGAACT 
GGGGTAATTC CGATTTCAGC GAGTAACAGA AACTCCATCA GGCGTGCATT TAATGATGTA 
GAAACCGCAT TAAGCGAAGG ACATATCGTC TGTATTTTCC CAGAGGGGAA ATTAACCTCA 
GACGGTGAAA TGAATGAATT CATGCGTGGC ATTGATATTA TTCTGCGTCG CAGCCCAGTA 
CCTGTCATAC CCGTGGCACT CAAAGGCTTA TGGGGAAGCT ATTTCAGCCG CGCGAAAGGC 
CGCGCATGTT GTGGCTTACC GACTCGATTT TGGTCAAAGC TAGAAATTGA GGCCGGACAG 
CCGGTTCCAC CAAATGAAGC AACGGCAAAA ACGATGTTCG ATAGAGTGCA TCAACTTAGA 
GGCGACTGGC GATAA 

 

Protein sequence

MSSDRQPSLL TQRKFLPYFI TQFFGAFNDN IFKNVLLLFV AFAGSSALPI SSNLFINLAA 
GLFILPFFLF SASAGVLADK YEKSWFIRKV KLFEIAIMLL GAIGFITESY GVLLLLLFLM 
GTQSAFFGPV KYALLPQKLN AKELVPGNAL VEAGTFIAIL IGTLGAGIIA SADNAKYLAA 
FCVVLFALLG YLSSRSIPFA AASAPNLSFR WQPYKQTKHT LSIAKSDRVV FQCIMAISWF 
WFLGAAYLTQ FPNFTKIYLN GTESAVSFLL ALFSIGIALG SLLCNWISNH RIEVGIVPIG 
ALGITVFGYL MATSIPSDLP IFHNFVDFFR YEPFWPLFFY LLMIGASGGL FIVPLYALMQ 
HRAKETERAQ VIAGLNIFNS LFMVGSAVLG IVCLSIIKMT IPQLFALLAI LNFLVAAYIF 
LQIPIFVVRF VVWMLTHTIY RVKHKNLHNL PEQGGALIVC NHVSYMDALL LSAVCPRLIR 
FVMEEDYANL PPLRRFLRRT GVIPISASNR NSIRRAFNDV ETALSEGHIV CIFPEGKLTS 
DGEMNEFMRG IDIILRRSPV PVIPVALKGL WGSYFSRAKG RACCGLPTRF WSKLEIEAGQ 
PVPPNEATAK TMFDRVHQLR GDWR