Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004022 |
Symbol | |
ID | 8557758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2675563 |
End bp | 2676672 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407120 |
Product | membrane-fusion protein |
Protein accession | YP_003286647 |
Protein GI | 262394793 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000160707 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATGA AAGCCACGTT ATCGTTATCT GTTTTAACGC TTTCTATATT AATGAGTTCT CCATCAGCTT TCGCAGCTAT GCGAGGCTCA GCAGTTACCG TCGTAACTGA GCAAGTAGAA ACGCACGAGA TCAATCAATC CTTATCGCTT ATCGGTAAAT TAGAAGCGGC GGAGTCTGTG GTTGTTGCAT CGGAAGTCGC CGGCAAAGTG AATCAAATCG CTGTTAAAGC GAATCAAAAT GTCCAACAAG GTCAGCTGTT AATCAAGTTG GATGATGATA AGGCTCAAGC CGCTTTGATT GAGGCAAAGG CGTACCTTAA AGATGAACAA CGTAAGCTAA AAGAGTTTCA ACGTTTGGTT AAGCGAAATG CTATCACCCA AACTGAGATC GACGCACAAA AAGCAAGCGT TGAAATTGCA CAAGCAAGGC TGGACGCTGC TCAAGCAAAT TTGGCCGATC TTCATATTAC GGCTCCATTC TCTGGCACTG TTGGTTTCAT CGATTTTAGT CGCGGTAAAA TGGTTAGCGC GGGTACAGAG CTGTTGACCT TGGATGACCT TTCCGTCATG GAGCTGGACT TACAAGTACC GGAGCGCTAT TTATCGATGC TTTCTATTGG TATGGAAGTC ATTGCCAAAA CCAGTGCATG GGGTGAACAG ACGTTTACTG GTCAGGTTAC AGGCATTGAT ACGCGGATCA GCTCAGAAAC TCTGAACCTG CGTGTGCGTA TTGAGTTTGA GAACCCTGAA AACCGCTTAA AGCCGGGCAT GTTAATGAAT GCATCATTGG CCTTCCCTGC GATTGAAGCG CCAATTATCC CGGTTCAAGC ACTAGAATAC TCTGGCACCA AGCGTTACGT ATACGTCATC GATGACAACA ATAAAGCGAC TCGACAAGAA GTCATTCTCG GTGCTCGTGT CGATAACGAA GTCGTTATTG AATCAGGCGT TGAAGTTGGC GACAAAATTG TTGTACAGGG CATAGTTAAT ATGCGAGATG GTGTTGAAGT TAAGGAAATT GTCGCACCAG GAAAGTCAGA AACAGCTAAC GCAACTGGTA ATCAAGGTGT TCAAAGCACG CAAGACGAAG CGGCTAAGGA AGCAAACTAA
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Protein sequence | MSMKATLSLS VLTLSILMSS PSAFAAMRGS AVTVVTEQVE THEINQSLSL IGKLEAAESV VVASEVAGKV NQIAVKANQN VQQGQLLIKL DDDKAQAALI EAKAYLKDEQ RKLKEFQRLV KRNAITQTEI DAQKASVEIA QARLDAAQAN LADLHITAPF SGTVGFIDFS RGKMVSAGTE LLTLDDLSVM ELDLQVPERY LSMLSIGMEV IAKTSAWGEQ TFTGQVTGID TRISSETLNL RVRIEFENPE NRLKPGMLMN ASLAFPAIEA PIIPVQALEY SGTKRYVYVI DDNNKATRQE VILGARVDNE VVIESGVEVG DKIVVQGIVN MRDGVEVKEI VAPGKSETAN ATGNQGVQST QDEAAKEAN
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