| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003990 |
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| Symbol | |
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| ID | 8557726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2636111 |
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| End bp | 2637355 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407088 |
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| Product | lipoprotein releasing system transmembrane protein LolE |
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| Protein accession | YP_003286615 |
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| Protein GI | 262394761 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family
[TIGR02213] lipoprotein releasing system, transmembrane protein LolE |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTTCAT CTTTAGCATT GATGATTGGT GGTCGCTTCA GTCGAGCGAA AAAGCGCAAC
AAGATGGTGT CTTTCATTTC GCTTTCTTCA ACGATTGGCA TTGCGGTTGG TGTAGCCGTT
ATCATTATCG GTCTTTCTGC AATGAATGGC TTTGAGCGTG AGCTGCAATC GCGTGTGTTG
TCTGTGATTC CACACGGTGA GTTGGAAGGT GTTAATGGAC CGCTTCATAA CTACACCAAA
ACGATGAATC AAGCTCTAAA CCATGAACAT GTTGTGGCGG CAGCACCGTA CGTTCGTTTT
ACGGGCTTAG CAGAAAAAGG CAGTAAGCTA AAAGCGATAG AAGTTCGTGG CGTAGAGCCT
ACTTTCGAGC AAGCGGTGTC GAGCTTATCG AATTTTATTG ACCAAGAAGC TTGGCAAAAC
TTTTATGCCG GTCAGCAGCA AGTGATCTTA GGCCGAGGTG TAGCCAACGA GTTAAATGTC
GCCGTGGGGG ATTACATTAC GTTGATGATT CCGCAAGCAG GCGGCGCAAA CAAAGTGCAG
GCTCCCAAGC GTGTGCGCGT GAAGGTGTCT GGGTTCTTAA CGTTGAATGG CCAAATAGAC
CACTCTTTAG CGTTAGTGCC ATTAGCGGAT GCTCAGCAAT ACGCGAGGTT AGGGGAAGGG
GTCACTGGCA TTTCACTAAA AACGGATGAT GTTCTCAATG CACCTTCTAT TGTTCGTGAG
GTAGGTAGCA TGGTGGATGT TTACGTGTAT TTGAAAAGCT GGCAGCAAAA GTTTGGTTTT
TTGTATCGCG ATATTCAGCT CGTACGCACC ATTATGTACT TGGTGATGGT ACTGGTGATT
GGTGTGGCAT GTTTTAACAT TGTGTCTACG CTGATGATGG CAGTGAAAGA TCGAGCCGCA
GAAATTGCAA TTTTGCGAAC TATGGGAGCG AAAGATAGCC TAATCAAGCG TATCTTTGTT
TGGCAAGGCG TGTTCTCTGG TGTATTTGGC AGTCTCGTCG GCAGTGTTAT TGGTGTCTTA
GTGGCGTTAA ACCTGACTCC GTTGATTAAA GGGTTAGAGA GTTTAATTGG TCATCAGTTT
TTATCGGGTG ATATTTACTT CGTTGACTTC TTACCATCAC AGTTACACTG GCCAGACGTA
GCATTGGTAT CGATGACGGC GATCGTTCTG AGTTTGCTTG CAACGTGGTA TCCCGCTTCT
CGCGCCGCGA AGTTAAATCC AGCAGCGGTG CTGAGTTCTA AATAA
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| Protein sequence | MFSSLALMIG GRFSRAKKRN KMVSFISLSS TIGIAVGVAV IIIGLSAMNG FERELQSRVL
SVIPHGELEG VNGPLHNYTK TMNQALNHEH VVAAAPYVRF TGLAEKGSKL KAIEVRGVEP
TFEQAVSSLS NFIDQEAWQN FYAGQQQVIL GRGVANELNV AVGDYITLMI PQAGGANKVQ
APKRVRVKVS GFLTLNGQID HSLALVPLAD AQQYARLGEG VTGISLKTDD VLNAPSIVRE
VGSMVDVYVY LKSWQQKFGF LYRDIQLVRT IMYLVMVLVI GVACFNIVST LMMAVKDRAA
EIAILRTMGA KDSLIKRIFV WQGVFSGVFG SLVGSVIGVL VALNLTPLIK GLESLIGHQF
LSGDIYFVDF LPSQLHWPDV ALVSMTAIVL SLLATWYPAS RAAKLNPAAV LSSK
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