| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003988 |
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| Symbol | |
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| ID | 8557724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2633186 |
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| End bp | 2635444 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407086 |
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| Product | predicted hydrolase of the metallo-beta-lactamase superfamily |
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| Protein accession | YP_003286613 |
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| Protein GI | 262394759 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTCT CAGAAAAAAG TTGGACCTTG GCGTTATTTG TAGCGAGCGT AATTTCGTCA
GCTTGGTGGC CGACAATACC AGATTGGCGT TGGCTGCTGC TGGGAATAAT AACCACTGGC
TCAATAATCA AATTACGTCG TGGCTTAATT AGCATAGGCG CAATTGCGGG CTTTATGGTT
GTCATCGTCC ACGGCAATGT ATTGGAGTCT CAGAGACAAG CCCTTTTTCA AGCAGGGGAG
AATATTACCA TAATTGGTAA AGTTGACAGC CCTTTTACGC AAATAAGTCA CGGATATGAA
GGCATTGTGG CTCTAAAAAA GGTAAATTCT CAAACTCTGT TACCTTTTCT TAAACCTAAA
ATCCGTCTTA TTACGCCTTT TCCACTCGAT GTTAACAGTG AGTTTACGAC ATCCGTCTCG
TTAAAGCCGA TTACAGGCCT ACGCAACGAA GCTGGTTTTG ACGCTGAAAA GCACGCAATG
GGTAAAAGTA TTATCGCACG CGGTGTTGTT AACAAGGATG TTACCTGGAT TATTCGTTCT
ACTACATCTT TGCGCCAAGC CATTATCGCT GATGTTTCGG AGGATGTGTC CTCCCTTCAT
CATTTCTCGT TAATAAATGC GTTAGTTTTT GCCGATCGCT CTTGGTTATC TAAGGAGGAT
TGGCAAGCAC TCAGAGACAG TGGTTTACTG CACTTGGTCT CGATTTCGGG CTTACATATT
GGTATGGCGT TTACTTTTGG GGTAGTGGTG GGCGGTGCCA TTCGTTATGC GTTACCTCAA
TACCAGCTAT TGCCTAGCTT ATGTGGGCTG ATGTTTGCCG TTGCCTATGC TTGGTTAGCG
GACTTCTCAT TACCTACTAC CCGCGCGGTG TCTGTATGTG TTATTTACGT CGTTCTCAAA
TATACCTTAG TGCACTGGGC TTCCTGGCGG GTACTTTTGC TCGCGGTAGC GCTACAACTG
CTTGTTCAAC CTTTTGCATC GTATAGCATG AGTTTTTGGT TATCGTATTT GTCAGTTTGC
GCAGTGCTGT TTGCAATCAA TTTGGTTCGG CATCAAAACG GGGGCTGGAA GGCGAAGTTA
AAAGTGTTAT TGCTTACTCA ATTGATGTTG AGTGCGTTAA TCGTGCCTAT TAGTGGCTAT
TACTTTTCTG GTTTCAGTTT GTCATCAATT GCATACAACT TGGCGTTTAT TCCTTGGTTC
GGATTTATCG TTGTGCCTTT GATGTTTCTG GCCCTGTTCT CATCTTTATT TCTTGAAATG
ATAGCAAAGC CTCTGTGGCA GTTGGTGGAC TGGTCATTGC AGCCATTGAG CACGTCAATT
CAGTACGCGA TAGGCTCCTG GCAAGCCATT AGTATAGAAA TGACAGGGTT GATTCTGGCG
GGAATTATTT GCTTGGTGTT TCAACGATTC ATGTTTCAGT ACGCGTGGTG TTTGTTACTT
GGCATTGTAA TTAGTATTAA GCTCACATCG GAATATGATC AGCAACATTG GCGCATTGAT
GTACTAGATG TGGGCCATGG CCTTGCGGTG ATTGTAGAAA AAGACGATAA AGTGTTGCTC
TATGATACAG GTAAAGCATG GCAAAATGGC AGTATTGCGG AGCAGGTCGT CACTCCGGTC
TTGCATCAAC GAGGTTATGA AAGCATCGAT ACGATGATCC TCAGCCACTC CGACAATGAC
CATGCAGGAG GACGCTTGTT CATTGAAGAT TCCTTTTCGC CACAGCGCAA ACTCAGTAGC
CAAAACTTTA TCGGATATGA GTCTTGTACT CGCGGCGATC ATTGGAAATG GCAAGGGTTA
AATATAGAAG TACTTTGGCC TCCTGCTCTT GTTCAACGTG CATATAATCC GCACTCTTGT
GTACTACGCC TTACCGACCC TATTTCTACG TTCAGTATGC TTTTTACTGG TGATATTGAG
ACCATTAGCG AGTGGATCTT GCTCAGGGAG CCTGAAAAGT TAAAAAGTGA TGTGATGTTG
GTCCCTCATC ATGGTAGTAA AAGTTCGTCG AATCCTCGCT TTATTGAAGC GGTAAACCCG
AGTGTGGCCG TTGCTTCTTT GGCAAAAAAT AATCAATGGG GAATGCCGGC AGAACATGTT
GTTACAGCAT ATCGCAAGCT TGACATTACT TGGCTTGATA CTGGGGAATA TGGTCAGGTA
AGCTTCTCTA TTCACCGTGA TAATTGGCGC TCAGAAACCA AACGTAGCGA TACATTTGAG
CCTTGGTATA GGCAGATGCT GCGTAAGGGA GTAGAATGA
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| Protein sequence | MTLSEKSWTL ALFVASVISS AWWPTIPDWR WLLLGIITTG SIIKLRRGLI SIGAIAGFMV
VIVHGNVLES QRQALFQAGE NITIIGKVDS PFTQISHGYE GIVALKKVNS QTLLPFLKPK
IRLITPFPLD VNSEFTTSVS LKPITGLRNE AGFDAEKHAM GKSIIARGVV NKDVTWIIRS
TTSLRQAIIA DVSEDVSSLH HFSLINALVF ADRSWLSKED WQALRDSGLL HLVSISGLHI
GMAFTFGVVV GGAIRYALPQ YQLLPSLCGL MFAVAYAWLA DFSLPTTRAV SVCVIYVVLK
YTLVHWASWR VLLLAVALQL LVQPFASYSM SFWLSYLSVC AVLFAINLVR HQNGGWKAKL
KVLLLTQLML SALIVPISGY YFSGFSLSSI AYNLAFIPWF GFIVVPLMFL ALFSSLFLEM
IAKPLWQLVD WSLQPLSTSI QYAIGSWQAI SIEMTGLILA GIICLVFQRF MFQYAWCLLL
GIVISIKLTS EYDQQHWRID VLDVGHGLAV IVEKDDKVLL YDTGKAWQNG SIAEQVVTPV
LHQRGYESID TMILSHSDND HAGGRLFIED SFSPQRKLSS QNFIGYESCT RGDHWKWQGL
NIEVLWPPAL VQRAYNPHSC VLRLTDPIST FSMLFTGDIE TISEWILLRE PEKLKSDVML
VPHHGSKSSS NPRFIEAVNP SVAVASLAKN NQWGMPAEHV VTAYRKLDIT WLDTGEYGQV
SFSIHRDNWR SETKRSDTFE PWYRQMLRKG VE
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