Gene VEA_003963 details

Gene Information

• Locus tag: VEA_003963
• ID: 8557699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2603642
• End bp: 2605717
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646407061
• Product: ATP-dependent helicase DinG/Rad3
• Protein accession: YP_003286588
• Protein GI: 262394734
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGACCA GTAACATTCA AAAATCGATT CGTAATAGCT ATCAAAACCT GCAAGATCAA 
CTTGATAACT TTGTACCTAG AAGAGCACAA AACTACCTTG TTGCAGAGAT TGCAAAAACG 
CTGTGCGGTC AGTACCACAA ATCTAACCGA ATACTGGTTG CAGAAGCAGG GACTGGAATT 
GGTAAGTCGC TCTCCTATCT AATGGCTGCC ATCCCCGTGG CTGTACATAA CAATAGAAAA 
GTGGTTATCT CAACGGCGAC CGTAGCTCTG CAAGAACAGC TCATAAATAA AGACCTCCCT 
CTTTTTCGTC GGATTACCGA CCGAGAGTTT TCTTTTATTT TGGCAAAAGG CCGTCAACGA 
TATTGTTGTG CAGAAAAACT TGCTTCAGCT TGTGGCGCTG ATGGTGGTCA GTTAGCCATG 
TTCGAAACCA AGCCTAAGCA AAGAGATATA GAGCTGTTGG AAACAATGCA TCGCTCTCTT 
GCGCAAGGTA AGTGGGACGG TGACCGTGAT TCTTGGCCTA AAACCATTGA TGATAAGCTA 
TGGCAACTGA TTGTTAGTGA TAAACACAGT TGTAATAACA GCTTACCCGG CCATCGCGGC 
TGCCCATTCC AAAAAGCGCG CTCAGAGTTG GATAAGAATG ATGTCATCAT TGCGAACCAC 
TCTCTCGTCA TGGCAGACGC AGACTTGGGG GGCGGAGTAA TCTTACCTGA GCCAGAAAAC 
ACGATATACG TCTTTGACGA GGCACATCAC TTGCCTCATG TCGCCCGCGA TCATGCTTCA 
GCATCTGCGA GCTTAAAAGG TGCGGCAGCA TGGCTTGAGA AGTTAAATCA GTCGATTAGC 
AAGTTTTCAT CGCTCGCAGA CGAGAAGCGC GTAGCTCGAT TTCGCAACGA CCTTCAAGAC 
GCGGTTCAGA ACTTGATACC AGCACTGACT CAACTGCCTA AACAGTTCGA TCCAGCTCAA 
TTTGAAGAGA GTATCTACCG CTTTGAGCAC GGTGAACTAC CAGAATGGCT AGAGAACCAA 
TCCAAAGAGT TAAAGCAGTT CAGTAAAAAA GCAAATCAAA GTGTGGCAAA AATTGCCGAC 
CTTATTGCGG AAAGAGTAAA AGATGGTGAG CTTGCGACAA GATTAGCTGA ACCAGCGCTT 
GCAGAGCTCG GCTTCTACAT TCAAAGGTTA GAAAACCTGG CGCAAGTCTG GCACTTGATG 
GCTGAGCCAA CTCGTGAAAA AGGTGCGCCT TTAGCTCGCT GGTTAGAAAC CCACCCCGAT 
CGCGAGGGTG ATTTCATTGT GAGTGTTTCT CCGCTTGAAA TTGGATGGCA ACTCGACCAA 
CAAATTTGGA GCAGGTGCAT TGGCGCCATT TTAGTTTCCG CAACGATGCG TGCATTAAAC 
TCCTTCCATT ACTTTTGCCA TCAGGTTGGT ATTGATGGAA AACCAGAGTC AGGCACACAG 
TTTTTAGCGC TTGCGTCACC ATTCGATTAC CAAAACCAGG CAGAATTGCT CATCCCTGCG 
ATGAAATATG AACCACCAGC GCCTCAATTT ACTGAATATC TTATTGAGAT ATTGCCTAAG 
TACTTGGAAG ACAAGAAAGC CAACTTAGTA TTATTCTCAT CCTATTGGCA GATGAACCAA 
GTTGCGAAGG CGCTGTCTTC GGAGTTCATA AAAAAAGGCT GGGCGTTGCA AGTTCAAGGT 
GAAAGCTCAC GTCAAGAAAT TCTAAAAAAA CATAAAAAGC TAATAGAATC AAATAAAACC 
AGCATCTTAT TTGGTACTGG CAGTTTCTCT GAGGGGCTAG ATTTACCTGG CGAATTACTT 
GAAAACTTGG TGATTACAAA AATTCCATTT GGTGTTCCAA CCTCTCCTGT CGAACAGGCT 
CACTCCGAAT ATATCGAGAA AAAAGGTGGA AACCCGTTTA TGCAAATAAC TGTACCTGAC 
GCAAGCAAAA AGCTGATCCA GAGCGTAGGT CGCTTACTGC GTAAAGAGAG AGATTCTGGT 
AGAGTAACGA TTCTTGATCG ACGCCTAGTC ACTAAGCGAT ACGGACAAGC CTTAATCGAC 
TCACTACCTC CATTTAAACG TAAAATAGAA TATTAG 

 

Protein sequence

MLTSNIQKSI RNSYQNLQDQ LDNFVPRRAQ NYLVAEIAKT LCGQYHKSNR ILVAEAGTGI 
GKSLSYLMAA IPVAVHNNRK VVISTATVAL QEQLINKDLP LFRRITDREF SFILAKGRQR 
YCCAEKLASA CGADGGQLAM FETKPKQRDI ELLETMHRSL AQGKWDGDRD SWPKTIDDKL 
WQLIVSDKHS CNNSLPGHRG CPFQKARSEL DKNDVIIANH SLVMADADLG GGVILPEPEN 
TIYVFDEAHH LPHVARDHAS ASASLKGAAA WLEKLNQSIS KFSSLADEKR VARFRNDLQD 
AVQNLIPALT QLPKQFDPAQ FEESIYRFEH GELPEWLENQ SKELKQFSKK ANQSVAKIAD 
LIAERVKDGE LATRLAEPAL AELGFYIQRL ENLAQVWHLM AEPTREKGAP LARWLETHPD 
REGDFIVSVS PLEIGWQLDQ QIWSRCIGAI LVSATMRALN SFHYFCHQVG IDGKPESGTQ 
FLALASPFDY QNQAELLIPA MKYEPPAPQF TEYLIEILPK YLEDKKANLV LFSSYWQMNQ 
VAKALSSEFI KKGWALQVQG ESSRQEILKK HKKLIESNKT SILFGTGSFS EGLDLPGELL 
ENLVITKIPF GVPTSPVEQA HSEYIEKKGG NPFMQITVPD ASKKLIQSVG RLLRKERDSG 
RVTILDRRLV TKRYGQALID SLPPFKRKIE Y