| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003951 |
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| Symbol | |
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| ID | 8557687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2590340 |
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| End bp | 2591620 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407049 |
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| Product | 5-Enolpyruvylshikimate-3-phosphate synthase |
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| Protein accession | YP_003286576 |
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| Protein GI | 262394722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000960986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCC TAACGTTACA ACCTATCAAT AAAATTCAAG GGGAAGTGAA TCTTCCTGGC
TCTAAAAGCG TTTCTAATCG AGCTCTTTTA CTTGCTGCTC TTGCTAAAGG CAGAACTCGC
CTTACTAACC TCCTCGACAG TGATGATATC CGTCATATGC TGAATGCGCT GACTAAACTC
GGCGTTCAAT ACCAACTTTC CGAAGATAAA ACAGAATGTC TCGTTGAAGG CCTTGGGCGT
CCGTTTTCTG TCTCAGAACC GGTAGAGTTA TTTCTCGGTA ATGCTGGCAC TGCGATGCGA
CCGTTAGCTG CGGCTCTTTG TCTTGGAGAA GGGGAGTATG TACTGACGGG CGAACCTCGT
ATGAAAGAGC GTCCAATTGG TCACCTTGTC ACGGCACTGA AAGATGCTGG TGCGAAGGTT
GAGTACATGG AAAACGAGAA CTTTCCGCCT CTCAAAATAG TCGGTACTGG CCTAAAAGCA
GGTACAGTTT CTATCGATGG ATCCATTTCA AGTCAGTTCT TGACCGCTTT CTTAATGTCT
GCGCCATTGG CTGAAGGTGA AATTCGCATC AACATCGAAG GCGAGTTGGT TTCTAAGCCT
TATATCGATA TCACCCTGCA TATCATGAAG CAGTTTGGGG TCGATGTGAT CAACAACGAC
TATCAAGAGT TTGTGATTCC TGCCGGTCAG CAATACATCG CTCCAGGTGA TTTCTTGGTT
GAAGGTGATG CGTCTTCTGC TTCTTACTTC TTAGCGGCGG CAGCCATCAA AGGCGGAGAA
GTTAAAGTCA CGGGTATCGG TAAAAACAGC ATTCAAGGTG ATATTCAATT TGCTGATGCG
CTTGAAAAAA TGGGTGCAGA AATTGAATGG GGTGATGACT ACGTAATTTC ACGTGTTGGT
CAATTGAAAG GCATCGATAT GGATTACAAC CATATCCCTG ATGCTGCAAT GACCATCGCG
ACAACAGCGC TATTTGCCGA AGGCACTACT GCTATTCGTA ACGTTTATAA CTGGCGTGTA
AAAGAAACAG ACCGTTTGTC AGCTATGGCG ACGGAATTAC GTAAAGTGGG TGCGGAAGTG
GAAGAAGGGG AAGACTACAT CATTGTCAAA CCTGTCTCTC AGTTAAAGCA TGCTGCGATT
GATACTTACG ATGATCATCG AATGGCGATG TGTTTTTCGC TGGTGGCACT TAGTGATACG
CCTGTGACGA TTAACGATCC AAAGTGTACG TCGAAAACGT TCCCTGACTA CTTCGACAAA
CTTAAGGCTT TAAGCTGCTA A
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| Protein sequence | MESLTLQPIN KIQGEVNLPG SKSVSNRALL LAALAKGRTR LTNLLDSDDI RHMLNALTKL
GVQYQLSEDK TECLVEGLGR PFSVSEPVEL FLGNAGTAMR PLAAALCLGE GEYVLTGEPR
MKERPIGHLV TALKDAGAKV EYMENENFPP LKIVGTGLKA GTVSIDGSIS SQFLTAFLMS
APLAEGEIRI NIEGELVSKP YIDITLHIMK QFGVDVINND YQEFVIPAGQ QYIAPGDFLV
EGDASSASYF LAAAAIKGGE VKVTGIGKNS IQGDIQFADA LEKMGAEIEW GDDYVISRVG
QLKGIDMDYN HIPDAAMTIA TTALFAEGTT AIRNVYNWRV KETDRLSAMA TELRKVGAEV
EEGEDYIIVK PVSQLKHAAI DTYDDHRMAM CFSLVALSDT PVTINDPKCT SKTFPDYFDK
LKALSC
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