| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003912 |
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| Symbol | |
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| ID | 8557648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2548487 |
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| End bp | 2549011 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407010 |
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| Product | OmpA precursor |
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| Protein accession | YP_003286537 |
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| Protein GI | 262394683 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0204489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ACAAGGTTCT AAAAGGGCTA CTAATCGCGC TTCCTGTAAT GGCTGTTACA
GCGTGTAGTT CAAGCGACGA CGCTGCTTCT AACACTGGTG CAGCAACAAA CAACAATGGC
GCAGTTGAAA CAACAGTAGC TACGCCAATT GATCAAAGCG GTCAGCTAAC AGAGCAAGAG
CTAAAAGAGC AAGCGCTACG TGAAACTCAA ACAATCTACT TTGCTTTTGA TAACTCAACA
ATTGCAGCAG ATTACGAAGA GATGCTTGCA GCTCATGCTT CTTACTTAAG CAAGAACCCA
GCTCTTAACG TAACTATCGA AGGTCACGCT GATGAGCGTG GTACTCCTGA GTACAACATC
GCTCTTGGTG AGCGTCGTGC ACAAGCAGTA GCGAACTACC TGCAAGCACT AGGTGTTCAA
GCTGACCAAA TCTCAATCGT TAGCTACGGT GAAGAGAAGC CACTTCTTCT AGGTCAATCA
GATGAAGTTT ACGCTAAGAA CCGTCGCGCG GTTCTAGTAT ACTAA
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| Protein sequence | MQLNKVLKGL LIALPVMAVT ACSSSDDAAS NTGAATNNNG AVETTVATPI DQSGQLTEQE
LKEQALRETQ TIYFAFDNST IAADYEEMLA AHASYLSKNP ALNVTIEGHA DERGTPEYNI
ALGERRAQAV ANYLQALGVQ ADQISIVSYG EEKPLLLGQS DEVYAKNRRA VLVY
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