Gene VEA_003906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003906 
Symbol 
ID8557642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2543073 
End bp2544239 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content44% 
IMG OID646407004 
Productglutathionylspermidine synthase 
Protein accessionYP_003286531 
Protein GI262394677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0754] Glutathionylspermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.763675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGAC GAGAAATACA AGAACGAGAA AACTGGCGTG ATTTAGCACG CCAGTTTGGT 
TTTGGCTTCC ATTCCATGTA TGACCAACCG TATTGGGATG AGAGTGCTTA CTATCAATTC
ACGCTTGAGC AAATAGAGAA CGATATTGAA GCGCCCACTG AAGAGCTGCA TCAGATGTGT
CTGGCTATTG TGGATGAAGT AGTTCGGAGT GAGAGGTTGC TGACGCAATG TGCGATCCCT
GAATTTATGT GGGAGCAGGT TGCTTCTTCG TGGCACCGAA ATGAACCCTC ACTCTATTCG
CGTCTGGATT TTGCATACAA CGGAACTTCG CCAGCTAAGT TACTGGAGAA CAATGCGGAT
ACGCCGACCA GCCTGTTTGA AACGGGTTTT TGGCAGTGGG TGTGGTTAGA GGATGTTGTA
AATAAAGGTC TAATTCACCA GAGCGCGGAT CAATTCAACA TTCTTCAAGA TTTTTTGATT
GAGCGTTTTT CCGAGATAGC CAAATATCAA CCCGGGCAAA CCCTTCACTT TAGCTGCTGC
AAGTACACTG AAGAAGATAA AGGGACTGTC CAGTATTTAG AAGATTGCGC GCGCGAAGCT
GGGTTAGCGA CGGCGTTTGT TTATGTCGAA GATATTGGTG CGACGGAAGA TGGTCTGTTT
GTGGATGCAG ATGACAGAGC GATTCGTTGG ATGTTCAAGC TTTATCCGTG GGAGTTTATG
TTTGAAGAGG AATATGCGAA ATACCTAGCG ACCGCGAAAG TGAATTGGTT AGAACCTATG
TGGAAGTCGA TTCTATCCAA CAAAGCACTT TTACCGTTAT TGTGGGAGCG CTTTCCGAAT
CATCCTAATC TTTTACCTGC CTATTTTGCT AACGATTCAA AAGCGAACAC TTTGAAAGAT
TTTGTAATCA AACCACTATT CTCTCGAGAA GGCGCAAATA TTGAGGTCGT CAAAGGTGGG
AAACGCATAC TCAAAACAGC AGGGCCTTAT GAATCTAAAT TCAATATCGT CCAGCAGTAT
CATCCGTTAC CCAAGTTTGG GCAAAGCCAT ACATTAATTG GCAGCTGGTT AGTCAACGAT
AGAGCCGCTG GGATTTCGAT TCGGGAAGAC ACTAGCTTAG TCACGCAAGA TATGTCGCGA
TATATTCCAC ATGTGATTTT AACATGA
 
Protein sequence
MFRREIQERE NWRDLARQFG FGFHSMYDQP YWDESAYYQF TLEQIENDIE APTEELHQMC 
LAIVDEVVRS ERLLTQCAIP EFMWEQVASS WHRNEPSLYS RLDFAYNGTS PAKLLENNAD
TPTSLFETGF WQWVWLEDVV NKGLIHQSAD QFNILQDFLI ERFSEIAKYQ PGQTLHFSCC
KYTEEDKGTV QYLEDCAREA GLATAFVYVE DIGATEDGLF VDADDRAIRW MFKLYPWEFM
FEEEYAKYLA TAKVNWLEPM WKSILSNKAL LPLLWERFPN HPNLLPAYFA NDSKANTLKD
FVIKPLFSRE GANIEVVKGG KRILKTAGPY ESKFNIVQQY HPLPKFGQSH TLIGSWLVND
RAAGISIRED TSLVTQDMSR YIPHVILT