| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003895 |
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| Symbol | |
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| ID | 8557630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2528284 |
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| End bp | 2529423 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406992 |
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| Product | membrane fusion protein of RND family multidrug efflux pump |
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| Protein accession | YP_003286520 |
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| Protein GI | 262394666 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00341624 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGTA AAACCACGCT ATCTCTGCTG ATTGCGTCGA GCCTTTTTGT GGTTGGATGT
CAACCTAGCG AAGAAGGATC GAGCCAAGGT AGTGGTCCTG CGCCCGCAAC CGAAGTTGAA
GTGTTAACGG TGGAACCAAC TCGCCAAACG TTAACTGTCG AGTTGCCAGG TCGTAGCCGT
GCATTCAAAG AAGCGGAAGT TCGTCCGCAA GTTACAGGCA TTATTTCAGA GCGAAATTTT
GTTGAAGGCG GCCTTGTTGA ACAAGGACAG TCCCTATATC AAATTGATGA TTCATCATTT
CAAGCGGATT TGCTGAGCGC TGAAGCGGAA TTAATCCGAG CTCAAGCAGC GGCAGAATCG
ACCCATGCCA CAGTGAAGCG TTACAGAACC TTGATCACCA AAAAGTCCAT CAGCCAACAA
GATTTGGATG AAGCAGAAGC AGCATACAAG GAAGCGCAAG CACAGGTCCT AGTCGCAAAA
GCTAAGATCA ATACGGCAAA AATCAATTTA GATTACACGC AAGTGAAAGC TCCGATTAGC
GGTGTGATCG GTAAATCGAG TGTGACGGCG GGTGCGTTGG TTACGGCTAA CCAAGCAGCC
AAATTAGCGA CCATTCAGCA GCTTGATCCT ATCAACGTTG ATATTGTGCA ATCATCCGCG
CAACTGCTGC GTTTAAAAGC GGCTCTTTCC CAAGGTCATA TGCAAGAGGA TGATTCTGCG
CAAGTTACAT TGATGCTTGA AGATGGCAGC ACGTACGAAC ATAAAGGCAC GATGAAATTT
ACCGAGGTCA ATGTGAACGA AAGCACGGGT AGCGTGACGC TTCGTGCTGA ATTCCCAAAC
CCTGACGGTT TGTTGCTACC AGGAATGTTT GTTCGTGCGA CGGTTATTAC TGGTGTTGAC
CCTGACGCGA TTCTGATACC ACAAAATACC GTTTCTCGCG ATGCGACAGG CAAAGCAACA
GTGATGATGG TGAATGGTGA GAACAAAGTG GAAGCGAGAC CAGTGAAGAC AGCCGAAGCG
ATCAATAGTC AATGGCGCAT TATTGATGGT TTGGAAGCGG GCGATAAAGT CATCACTGCT
GGGTTACAAA AGGTAGGTCC AGGCAGCCCT GTAACTATCC AAAACGGTGA ACAGGAGTAA
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| Protein sequence | MRRKTTLSLL IASSLFVVGC QPSEEGSSQG SGPAPATEVE VLTVEPTRQT LTVELPGRSR
AFKEAEVRPQ VTGIISERNF VEGGLVEQGQ SLYQIDDSSF QADLLSAEAE LIRAQAAAES
THATVKRYRT LITKKSISQQ DLDEAEAAYK EAQAQVLVAK AKINTAKINL DYTQVKAPIS
GVIGKSSVTA GALVTANQAA KLATIQQLDP INVDIVQSSA QLLRLKAALS QGHMQEDDSA
QVTLMLEDGS TYEHKGTMKF TEVNVNESTG SVTLRAEFPN PDGLLLPGMF VRATVITGVD
PDAILIPQNT VSRDATGKAT VMMVNGENKV EARPVKTAEA INSQWRIIDG LEAGDKVITA
GLQKVGPGSP VTIQNGEQE
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