Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003876 |
Symbol | |
ID | 8557611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2504310 |
End bp | 2505617 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646406973 |
Product | seryl-tRNA synthetase |
Protein accession | YP_003286501 |
Protein GI | 262394647 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00729663 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGATT CTAAATTACT TCGTACAGAG CTGGATGAAA CAGCTGCTAA ACTGGCGCGT CGTGGCTTTA AGCTAGACGT AGAGACTATT CGTAAACTTG AAGAACAACG TAAGTCCATT CAAGTAGAAG TAGAAAATTT ACAATCCACG CGTAACTCCA TCTCCAAGCA AATCGGCCAA AAAATGGCAG CTGGCGACAA AGAAGGCGCA GAAGAGATCA AGAAACAAAT CGGTACTCTA GGTAGCGATC TTGATGCGAA GAAAGTTGAA CTTGAGCAAG TAATGGCTCA ACTAGACGAA TTCACGCTTT CTGTACCAAA TATCCCAGCA GATGAAGTGC CAGATGGCAA AGACGAGAAC GACAACGTTG AAATCTCTCG TTGGGGTGAG CCTAAGACTT ACGACTTCGA TTTGAAAGAC CATGTTGACC TAGGTGAAAT GGGTGGCGGT CTAGACTTCG CAAGCGCAGT TAAGATCACT GGCGCACGTT TCATCGTGAT GAAAGGCCAA TTTGCTCGTC TACACCGTGC AATCGCTCAG TTCATGCTAG ATCTTCACAC AGAAGAACAC GGCTACACAG AAATGTACGT ACCTTACCTA GTAAACTCTG ACAGCCTATT CGGTACTGGC CAGCTTCCTA AGTTCGGTAA AGACCTTTTC CACACAGAGC CTCTAGCGGA AAAAGTAAAC GACGAAGAGC CACGTAAACT GTCGCTAATC CCTACGGCAG AAGTACCTGT AACGAACCTA GTTCGTGACA CGATTTCTGA CGAAGCGGAT CTACCTATCA AGATGACAGC ACACACGCCA TGTTTCCGTT CAGAAGCGGG TTCATACGGT CGTGATACTC GTGGTCTGAT TCGTATGCAC CAGTTCGACA AAGTTGAGCT AGTACAAATC ACTAAGCCAG AAGATTCAAT GAACGCACTA GAAGAGCTAA CAGGTCACGC TGAGAAAGTT CTACAACTTC TAGAGCTTCC TTACCGTAAA GTGGTTCTTT GTACAGGTGA TATGGGCTTC GGCGCTCGTA AAACTTATGA CTTAGAAGTT TGGGTTCCTG CTCAAGAAAC TTACCGTGAA ATCTCTTCAT GTTCTAACAT GTGGGACTTC CAAGCTCGTC GTATGCAAGC GCGTTTCCGT CGTAAAGGCG AGAAGAAACC TGAGCTTGTA CACACGCTAA ACGGTTCTGG TCTAGCAGTA GGTCGTACAA TGGTTGCTAT CCTAGAAAAC AACCAAGAAG CAGACGGTCG CATTGCAATC CCTGCAGTAC TTCAGAAGTA CATGGGCGGC GCAACGCACA TCGGTTAA
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Protein sequence | MLDSKLLRTE LDETAAKLAR RGFKLDVETI RKLEEQRKSI QVEVENLQST RNSISKQIGQ KMAAGDKEGA EEIKKQIGTL GSDLDAKKVE LEQVMAQLDE FTLSVPNIPA DEVPDGKDEN DNVEISRWGE PKTYDFDLKD HVDLGEMGGG LDFASAVKIT GARFIVMKGQ FARLHRAIAQ FMLDLHTEEH GYTEMYVPYL VNSDSLFGTG QLPKFGKDLF HTEPLAEKVN DEEPRKLSLI PTAEVPVTNL VRDTISDEAD LPIKMTAHTP CFRSEAGSYG RDTRGLIRMH QFDKVELVQI TKPEDSMNAL EELTGHAEKV LQLLELPYRK VVLCTGDMGF GARKTYDLEV WVPAQETYRE ISSCSNMWDF QARRMQARFR RKGEKKPELV HTLNGSGLAV GRTMVAILEN NQEADGRIAI PAVLQKYMGG ATHIG
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