| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003857 |
|---|
| Symbol | |
|---|
| ID | 8557592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2488079 |
|---|
| End bp | 2489449 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646406954 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_003286482 |
|---|
| Protein GI | 262394628 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.574073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGT CAGCATTGAC TGCTGTTTCA CCAGTAGACG GCCGTTACGG AAGTAAGACG
ATTGCGTTAC GCGAAATTTT CAGCGAGTAC GGTCTACTAA AATACCGTAC TATCGTAGAA
ATTCGTTGGC TACAGAAGCT AGCGGCTACT GCTGAAATTG CAGAAGTGCC AGCATTCAGC
GCAGAAGCTA ACCAATTCCT AGACGACCTT GCTGCTAACT TCTCTGAAGG AGATGCACGC
CGTATTAAAG AAATCGAGCG TACAACTAAC CACGACGTTA AAGCGGTTGA GTACTTCTTA
AAAGAGAAAG TAGCAGACGT TCCTGAACTG CACGCTGTTA ATGAGTTCTT CCACTTTGCA
TGTACTTCTG AAGACATCAA TAACACCTCT CATGCGTTAA TGCTAAAAGA AGCACGTGAG
CAAGTGATTC TTCCAGAAAT CCGTAACCTA ATTGACGCTA TCAAAGCACT CGCAGTTGAA
TACCGCGACA TTCCTCTTCT ATCTCGTACA CACGGCCAGC CTGCTTCTCC ATCTACAATG
GGTAAAGAAA TGGCAAACGT GGCGTACCGT ATGGAGCGTC AATTCAAGCA AATCGAAAAC
GTTGAGATCC TAGCGAAAAT CAACGGTGCA GTAGGTAACT ACAACGCACA CCTTTCTGCT
TACCCAGAGC TAGATTGGCA CAAGTTCTCT GAAGAATTCA TTACAGAGTC TCTAGGCGTA
ACTTGGAACC CTTACACAAC ACAAATCGAG CCGCATGATT ACATCGCTGA GCTGTTCGAC
GCTATCGCTC GTTTCAACAC TATCCTGATT GACTTCGATC GTGACGTTTG GGGTTACATT
GCATTAGGCC ACTTTAAGCA AAAAACCATT GCTGGTGAGA TCGGTTCTTC AACAATGCCG
CACAAAGTTA ACCCAATCGA CTTTGAAAAC TCTGAAGGTA ACCTAGGTCT TGCGAACGCA
GTATTCGGCC ACCTAGCACA AAAGCTGCCT ATCTCTCGTT GGCAACGTGA CCTAACTGAC
TCAACGGTTC TACGTAACCT TGGCGTTGGT GTTGGCTACG CAATCATCGC TTACACTTCT
ACGCTAAAAG GTATCAGCAA GCTAGAAGTA AACTGTGAAG CACTTCTTGC TGAACTAGAC
AAGAACTGGG AAGTACTAGC TGAGCCAGTA CAAACAGTTA TGCGTCGTTA CGGCATCGAG
AAGCCATACG AGAAACTAAA AGAGCTAACT CGTGGTAAGC GTGTAGACGG CGAAGCAATG
CGCAACTTCA TCGACGGTCT TGAGCTCCCT GAGCACGAGA AAGCACGTCT GAAAGAGATG
ACGCCAGCGA ACTACATTGG TCAAGCGGTT GAGCTGACAG ATAAGCTGTA A
|
|---|
| Protein sequence | MELSALTAVS PVDGRYGSKT IALREIFSEY GLLKYRTIVE IRWLQKLAAT AEIAEVPAFS
AEANQFLDDL AANFSEGDAR RIKEIERTTN HDVKAVEYFL KEKVADVPEL HAVNEFFHFA
CTSEDINNTS HALMLKEARE QVILPEIRNL IDAIKALAVE YRDIPLLSRT HGQPASPSTM
GKEMANVAYR MERQFKQIEN VEILAKINGA VGNYNAHLSA YPELDWHKFS EEFITESLGV
TWNPYTTQIE PHDYIAELFD AIARFNTILI DFDRDVWGYI ALGHFKQKTI AGEIGSSTMP
HKVNPIDFEN SEGNLGLANA VFGHLAQKLP ISRWQRDLTD STVLRNLGVG VGYAIIAYTS
TLKGISKLEV NCEALLAELD KNWEVLAEPV QTVMRRYGIE KPYEKLKELT RGKRVDGEAM
RNFIDGLELP EHEKARLKEM TPANYIGQAV ELTDKL
|
|---|
| |