Gene VEA_003852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003852 
Symbol 
ID8557587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2483764 
End bp2484171 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID646406949 
ProductDNA-binding protein H-NS 
Protein accessionYP_003286477 
Protein GI262394623 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0195644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGC TGACTAAAAC CCTTCTAAAT ATCCGTAGCC TTCGTGCATT TTCTCGTGAG 
CTGACTCTAG AACAATTGGA AGAAGCTCTA GATAAACTAA CTACTGTTGT AGAAGAGCGT
CGTGAAGCAG AAGAAGCAGA ACGTGCAGCA CAAGCTGAGC AAGAAGCTAA GCTAGCAGAG
ATCGCAGAGA AAATTGCTCA AGACGGTATT GACGTAGAAG CGCTTATTAC TGCGCTATCT
GGCGAAACTA AGACGAAAGG CAAAGCGAAG CGTGCACCTC GTCCAGCTAA ATACAAATAC
ACAGACTCAA ACGGTAATGA GAAGACTTGG ACAGGCCAAG GTCGTACACC TTCTGCAATT
CAAGAGCAAC TTGATGCAGG TAAATCTCTG GATGATTTCC TGATCTAA
 
Protein sequence
MSELTKTLLN IRSLRAFSRE LTLEQLEEAL DKLTTVVEER REAEEAERAA QAEQEAKLAE 
IAEKIAQDGI DVEALITALS GETKTKGKAK RAPRPAKYKY TDSNGNEKTW TGQGRTPSAI
QEQLDAGKSL DDFLI