Gene VEA_003848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003848 
Symbol 
ID8557583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2477257 
End bp2478549 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content46% 
IMG OID646406945 
Producthistidinol dehydrogenase 
Protein accessionYP_003286473 
Protein GI262394619 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAG TCGTTTGGCA ATCTTTAAGT GAAGAGCAGC AAGATTCGAT CTTAGAACGT 
CCTGCTATTG CAGAAGGTGC AAATATCACT GCAGCAGTGT CTGAGGTTAT CGCTAAAGTT
CGAAATGAAG GCGACTCTGC TCTCAACGAG CTGACAGAAA AGTTTGATCG CGTTAAACCT
GAGTCCATTT GTGTTTCTTC TCAGGAAATT AAAGCCGCTT CAGAGCGCTT GTCTGAATCA
ATGAAAAACG CATTAGAGCA AGCTTATGCC AATATTTCTA AATTCCACAA AGCGCAAAAG
CCACAGCCAA TTAAAGTCGA AACTCAACCG GGTGTGCTTT GTGAACAGGT AACACGTCCA
ATTCAAAAAG TGGGTTTGTA CATTCCTGGT GGTAGCGCGC CATTGCCATC GACGGTTTTG
ATGCTTGGCG TGCCTGCGAA AATTGCTGGC TGTCGTAAAG TTGTGCTTTG CTCTCCGCCT
CCAATCGCTG ACGAGATCCT TTACGTAGCA AAATTGTGTG GCATTGATGA AGTGTACAAC
GTCGGCGGTG GTCAAGCTGT TGCTGCAATG GCATATGGTA CAGAGACCGT ATCAAAAGTT
GATAAGATTT TTGGCCCGGG TAACGCTTAC GTGACGGAAG CAAAGCGTCA GGTGAGCAAT
GATTTCCGTG GCGCAGCGAT TGATATGCCA GCGGGTCCTT CGGAAGTTCT TGTGATTGCG
GATGAAACAG CGGACCCAGA TTTTATTGCG GCGGACCTTC TAAGTCAGGC AGAGCATGGA
CCTGACTCTC AAGTTGTACT TGTGACGCCA TCAGCCATTA TTGCAGATCA GGTGACAGAT
GCCGTTCGTC GTCAATTGAA AGAGTTGTCT CGTTCAGAGA TTGCAGAAAA AGCGCTCGCA
TCGAGTTTAA TCATTATTGC TGAATCGATC ACCCAAGCGA TCTCTATTTC TAATTATTAT
GGTCCTGAGC ACTTAATTGT TCAGACTAAG AACCCACGCG AGCTTCTGCC TCTATTAGAC
AACGCAGGTT CGATCTTCCT TGGGGATTGG TCGCCTGAAT CTGCAGGTGA TTACGCATCG
GGCACTAACC ACGTTCTTCC TACTTACGGT TACACACGGA CATATTCAAG CTTAGGTTTG
GCTGATTTTT CTAAACGAAT GACGGTTCAA GAGCTTTCAG CTGACGGTCT TAAAAATCTT
GCGCCAACGG TTGTCACCAT GGCTGAAGCA GAAGGTCTGG ACGCCCACAA ACGTGCTGTT
ACTATCCGTG TAGAAAAATT AGCAAGTAAG TAA
 
Protein sequence
MRTVVWQSLS EEQQDSILER PAIAEGANIT AAVSEVIAKV RNEGDSALNE LTEKFDRVKP 
ESICVSSQEI KAASERLSES MKNALEQAYA NISKFHKAQK PQPIKVETQP GVLCEQVTRP
IQKVGLYIPG GSAPLPSTVL MLGVPAKIAG CRKVVLCSPP PIADEILYVA KLCGIDEVYN
VGGGQAVAAM AYGTETVSKV DKIFGPGNAY VTEAKRQVSN DFRGAAIDMP AGPSEVLVIA
DETADPDFIA ADLLSQAEHG PDSQVVLVTP SAIIADQVTD AVRRQLKELS RSEIAEKALA
SSLIIIAESI TQAISISNYY GPEHLIVQTK NPRELLPLLD NAGSIFLGDW SPESAGDYAS
GTNHVLPTYG YTRTYSSLGL ADFSKRMTVQ ELSADGLKNL APTVVTMAEA EGLDAHKRAV
TIRVEKLASK