Gene VEA_003839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003839 
Symbol 
ID8557574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2469431 
End bp2470102 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content40% 
IMG OID646406936 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_003286464 
Protein GI262394610 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000282951 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTTCA TGCGAACAGA AGCAACGAAA GCCGATGCAC TTTATGTATT AGGCGATCTG 
TTCGAGTTTT GGGTTGGAGA CGATGACAAA ACTCCTTTTG CCAATCAAAT CCGTACAGAG
TTCCAGCAAC TAACAAAGAC TGGCGTTCCT GTTTATTTCA TTCAGGGCAA TCGCGACTTC
CTATTGGGAA AACGCTTCTG TAAAGAGACA GGCATTACAT TATTAGATGA AGTTAGCCTC
ATAGACCTTT ATGGTACTAA AGCGGTTATT CTCCACGGTG ACACCTTGTG CACTGACGAT
ATTGATTATC AAAAATTCCG TAAGACTGTT CATCAACCTT GGTTGCAATG GCTGTTTAAT
CACATTCCTT GGTTTATTAA GAAGAAAATT GTCTCAAAAG TTCAATCCGA TATTCGTGAT
GATAAAATGA GCAAGCCTTT AGACATCATG GACGTCAATC AAAATGAAGT CGAGAAAGTG
ATGTCTCAGA ATTGCGTCAA CTTAATGATT CATGGTCACA CTCATCGCCC GAATACACAT
TTTTTTGACG TCGATGGCGT TAAAAAGACC CGGATAGTTC TAGGGGATTG GTATACGCAA
GGCTCAGTTT TACAAGTAAA TTCTGATGGC TTTGACCTAC AAACGAGACC ATTCATACAG
AATTTGCGTT AA
 
Protein sequence
MTFMRTEATK ADALYVLGDL FEFWVGDDDK TPFANQIRTE FQQLTKTGVP VYFIQGNRDF 
LLGKRFCKET GITLLDEVSL IDLYGTKAVI LHGDTLCTDD IDYQKFRKTV HQPWLQWLFN
HIPWFIKKKI VSKVQSDIRD DKMSKPLDIM DVNQNEVEKV MSQNCVNLMI HGHTHRPNTH
FFDVDGVKKT RIVLGDWYTQ GSVLQVNSDG FDLQTRPFIQ NLR