Gene VEA_003837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003837 
Symbol 
ID8557572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2467224 
End bp2468606 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content47% 
IMG OID646406934 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_003286462 
Protein GI262394608 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.55216e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGA TATATAACAC ACTCACAAGA CAGAAAGAGG AATTCAAACC AATTACAGCT 
GGCAAAGTCG GCATGTATGT CTGTGGAGTT ACCATCTACG ATCTCTGTCA CATCGGTCAC
GGTCGCACTT TTGTCTCCTT TGACGTGGTA TCACGTTACC TTCGTTACCT AGGTTACGAT
CTAACGTTTG TACGCAACAT CACAGACATC GATGATAAGA TCATTAAACG TGCGGCTGAA
AATGGCGAGT CTTGTGACTC ATTGACCGAG CGCTTGATCG GTGAAATGCA CGCAGACTTC
GACGCATTAA ACATGAAGCG CCCAGATATT GAGCCTCGTG CAACCCAGTT TATTCCAGAA
ATCATCGAAC TTGTTCAAAA ACTGATTGAA CGTGGCTTTG CTTACGTTGC GGATAATGGC
GATGTAATGT TTGAGGTTCG CAAGTTTGAC GAATACGGCA AACTGTCTAA ACAAGATTTG
GATCAGCTGC AAGCGGGCGC GCGCGTTGAT GTCGAAACAG CCAAACGCAG CCCACTAGAC
TTCGTTCTTT GGAAGATGTC TAAACCAGGT GAACCTACGT GGGAATCACC ATGGGGCCCT
GGTCGTCCAG GCTGGCACAT TGAATGTTCT GCTATGAACT CTTCAATCCT AGGTGATCAC
TTTGATATTC ACGGTGGCGG CTCTGATCTT CAGTTCCCAC ACCACGAAAA CGAAATCGCG
CAATCATGCT GTGCACACGA CACTAAGTAC GTAAATACTT GGATGCACAG TGGCATGGTG
ATGGTAGATC GCGAGAAGAT GTCTAAGTCT CTAGGCAACT TCTTTACTAT CCGTGACGTA
CTTGGTCACT ACGATGCAGA AACGGTTCGT TACTTCCTTA TGTCTGGTCA CTACCGTAGC
CAGTTAAACT ACAGCGAAGA GAACCTAAAC CAAGCACGCG CTTCGCTTGA GCGTCTATAC
ACTTCTCTAC GTGGTTTGGA TCTAAATGCT GCTCCTGCTG GTGGTGAAGA GTATGTATCT
CGCTTTACAG CAGCGATGAA CGATGACTTC AATACGCCAG AAGCGTACTC AGTTCTGTTC
GACATGGCGC GCGAAGTTAA CCGTCTGAAA ACAGAAAACC TAGAGAAAGC GAGCGAGCTA
GGTGCGTTAA TGCGTGAACT AGCAGATGTG ATCGGTATTC TTCACCAAGA TCCAGAAGCC
TTCCTAAAAG GTGATGCAGG TAACGATGAT GAAGTGGCTG AAATCGAAGC TCTTATCAAG
CTGCGTAACG ACTCTCGCGC TGCGAAAGAT TGGGCGAATG CAGATATGGC TCGTGACAAG
CTGACCGAAA TGGGTATTGT TCTGGAAGAT GGTCCAGAAG GCACAACGTG GCGTCGTAAG
TAA
 
Protein sequence
MLKIYNTLTR QKEEFKPITA GKVGMYVCGV TIYDLCHIGH GRTFVSFDVV SRYLRYLGYD 
LTFVRNITDI DDKIIKRAAE NGESCDSLTE RLIGEMHADF DALNMKRPDI EPRATQFIPE
IIELVQKLIE RGFAYVADNG DVMFEVRKFD EYGKLSKQDL DQLQAGARVD VETAKRSPLD
FVLWKMSKPG EPTWESPWGP GRPGWHIECS AMNSSILGDH FDIHGGGSDL QFPHHENEIA
QSCCAHDTKY VNTWMHSGMV MVDREKMSKS LGNFFTIRDV LGHYDAETVR YFLMSGHYRS
QLNYSEENLN QARASLERLY TSLRGLDLNA APAGGEEYVS RFTAAMNDDF NTPEAYSVLF
DMAREVNRLK TENLEKASEL GALMRELADV IGILHQDPEA FLKGDAGNDD EVAEIEALIK
LRNDSRAAKD WANADMARDK LTEMGIVLED GPEGTTWRRK