Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003811 |
Symbol | |
ID | 8557546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2442356 |
End bp | 2443387 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406908 |
Product | membrane-fusion protein |
Protein accession | YP_003286436 |
Protein GI | 262394582 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAGAT TGCTCATTCC TGTCGCCATC TCGGCTGTGT TGTCGGGGTG TGGTAAAGAA CTTCCCCCTG TTCCAGAACC TGAATCCCGC CCCGCAAAGC TATTTACAGT ATCTGTTGGC AATGCCCAAT TTGAACGACA CTTTCCTGCC ACGACGGAAG CTGGTGATAA AGCGGTACTG ACGTTTCGAG TTCCTGGACT TCTTCAAACG ATTGAGGTGA ATGAAGGTCA AGTCGTCAGC AAAGGCGATG TATTGGCTTC ATTAAACCCT GATGAATATG CTCTGCTTGA ACAGCAAGCT CGGGCAAATT TCGCGCTCGC AGACGTGCAG TACAAGCGAT ACCAAAAGTT ACGCAAAGAC CAAGTGGTGT CCGAACAAGA TTTTGATGAG GCAAAAGCGA ATCACAATTC AGCCAAAGCT CAGTGGAATC AAGCAAAGGC AAATTTAAGG TATACCAAAC TTGTCGCGCC ATATGATGGT ACGATTTCAT ATATTCCAGC AGAAAACCAT GAGTATGTCG CCGCAAAAGA AGGCGTGATG AATATTCAAT CCAACCAACT GCTTAAGGTG ATATTCCAAG TCCCTGACTA TCTGCTAAAT CGTTACACTC AGGGTAGCGA TGTCTCTGCC AGAATGGTCT TTGACGCTTT CCCCGAGCAG TCATTTGACT TGACCTTTCA AGAAATCGAT ACAGAAGCCG ATCCTAAAAC CGGTAGTTAC AAAGTCACTA TGGTTATGGA GCGACCATCA GAAATAGGCC TTTTACCGGG CATGTCTGGC AATGCTTACC TCCTATCTAA AAATGCTGGT GCAACAAAAA TTCCTAATTC CGCGCTGCTA GAAGAGAACG GCAAAACATA CGTTTGGCGT GTTGATGAGC AAGGCATTGT GTCCAAAGCC GCTATTGAGA TGAATGACAA AAACCAAGTG TTAGCGGGGC TTAACGATGG CGATCAAATC ATTATCTCTG GTGTTAGTGT AATTGAACCC GGAATTAAGG TAAGAGCCTG GATTAAGGAA AGAGGGTTGT AA
|
Protein sequence | MRRLLIPVAI SAVLSGCGKE LPPVPEPESR PAKLFTVSVG NAQFERHFPA TTEAGDKAVL TFRVPGLLQT IEVNEGQVVS KGDVLASLNP DEYALLEQQA RANFALADVQ YKRYQKLRKD QVVSEQDFDE AKANHNSAKA QWNQAKANLR YTKLVAPYDG TISYIPAENH EYVAAKEGVM NIQSNQLLKV IFQVPDYLLN RYTQGSDVSA RMVFDAFPEQ SFDLTFQEID TEADPKTGSY KVTMVMERPS EIGLLPGMSG NAYLLSKNAG ATKIPNSALL EENGKTYVWR VDEQGIVSKA AIEMNDKNQV LAGLNDGDQI IISGVSVIEP GIKVRAWIKE RGL
|
| |