Gene VEA_003800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003800 
Symbol 
ID8557535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2427871 
End bp2428926 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content47% 
IMG OID646406897 
ProductNADH oxidoreductase Hcr 
Protein accessionYP_003286425 
Protein GI262394571 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTG AATGGCAAGG TAACCAACCC GTCACACTCC GTTGCATCGA CAAATACTTC 
GAAACACACG ACACCGTCAG CATTAAGTTG GCTGAGCTAA CAGAGTCACT TCTGTTTCAG
TTTAAGCCTG GCCAGTTTAT TAACTTGGGC GTCGAAATTG ATGGAAAAAT GGAGTTTCGT
GCCTATTCAA TCAGCTCGAT CAATGAAGAC AATCACCTTC AACTCACCAT CAAACGAGTA
TCTGGCGGTA AAGTATCGAA CTACATCGTT GACTCGCTGC TGCTCGGTGA TACCGTTCAA
GCATTACCAC CAGCAGGTGA ATTTAACTGC ATCGACCATC CACCCGTGTT ACGTGATGGC
GAAACAAAAG CCTTGCTTAT CAGTGCAGGT TGCGGTGTCA CGCCCGTATA TTCGATGGCA
AAACACTGGC TGAGTAATCA AGATGAAAAC GACAACGATG TGGACATCGC ATTTCTTCAT
ATCGCGCGCA GCCCCGAAGA GACGATTTAC TACGATCAGC TAGAAACGTT CGACGCTGTG
TATCCAAACT TCCATTTAAA GCTGTTGCTA AAAAACCGCG AAGGAACGTC ACACCCACAA
GGTCGTTTGA ATGCCGACTG GCTTAAAGAG CTTGTTCCTG ATTTCAAACA GCGCACCGTT
TACCTGTGTG GTCCAAGCCA GTTCATGCAA GATGTTCACG GCTATTTGAA TGACCTTGGT
TTTGACATGA CGAACTTCTA CCAAGAGAGT TTTACGCCTG CGACTGGCGC AGAAACATCG
GTCTCCGATG AAGTTGTTCG TGTTTCTGTT CCTGACTTTG CTCAAACCAT CGATGCGCAA
AAAGGTCAGG TACTGGCCGA TGTGCTTGAA GGCGCAGGTT TACCATTAAT CGTCGCTTGT
CGTAGCGGCA TTTGTGGCTC GTGCAAATGC AAGGTTCGTC AAGGCAACGT CTCTTCCACC
AGCCTAGAAA CATTAACGCC AGAAGAAATT GAACAAGGCT ATGTGCTCGC CTGCTCATCA
ACCATCGAAG CGGATCTTGA AGTGCAGATT GGTTAG
 
Protein sequence
MFFEWQGNQP VTLRCIDKYF ETHDTVSIKL AELTESLLFQ FKPGQFINLG VEIDGKMEFR 
AYSISSINED NHLQLTIKRV SGGKVSNYIV DSLLLGDTVQ ALPPAGEFNC IDHPPVLRDG
ETKALLISAG CGVTPVYSMA KHWLSNQDEN DNDVDIAFLH IARSPEETIY YDQLETFDAV
YPNFHLKLLL KNREGTSHPQ GRLNADWLKE LVPDFKQRTV YLCGPSQFMQ DVHGYLNDLG
FDMTNFYQES FTPATGAETS VSDEVVRVSV PDFAQTIDAQ KGQVLADVLE GAGLPLIVAC
RSGICGSCKC KVRQGNVSST SLETLTPEEI EQGYVLACSS TIEADLEVQI G