Gene VEA_003797 details

Gene Information

• Locus tag: VEA_003797
• ID: 8557532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2423732
• End bp: 2424211
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646406894
• Product: putative outer membrane lipoprotein Pcp
• Protein accession: YP_003286422
• Protein GI: 262394568
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3133] Outer membrane lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAT ACGTCAAGCT AGGTATGCTG CTCATCATGT CTTGTATTGT TATGCTTAGC 
GGCTGTACCT CACCTAACCC GTACGGAGAT GCATACGGCT CTTCAGACAC ACGCAAAGTT 
CAGCAGGTTT ACTACGGAAC GATTGAAAAA GTTGAACCAG TAACCATTGA TGCCTCTACC 
CAATCCAACG CCATAGGTAC AATCGCTGGT GCCGCCGTGG GTGGTATATT AGGCTCAAAA 
GTCGGGGGCG GCTCTGGCTC GGATATCGCA GCTATTGGTG GTGGTCTGCT GGGTGGTTAT 
GCCGGCAGTA AAGCCGCTGA AGCAACCGCG AAACGAAATG GTGTGAATCT GACCATTCGC 
TTAGAGGATG GAAAAATAAT CTCTGTCGTT CAAGAAGCAA ACCCAAACAT GATTTTTCAG 
CCAGGCCAAG CGGTTCAAAT CAACATGTCT GGTAATGACG CAAGGGTTGT ACCTCGCTAA 

 

Protein sequence

MKKYVKLGML LIMSCIVMLS GCTSPNPYGD AYGSSDTRKV QQVYYGTIEK VEPVTIDAST 
QSNAIGTIAG AAVGGILGSK VGGGSGSDIA AIGGGLLGGY AGSKAAEATA KRNGVNLTIR 
LEDGKIISVV QEANPNMIFQ PGQAVQINMS GNDARVVPR