| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003772 |
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| Symbol | |
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| ID | 8557507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2396317 |
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| End bp | 2397693 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406869 |
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| Product | Na+ driven multidrug efflux pump |
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| Protein accession | YP_003286397 |
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| Protein GI | 262394543 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTTTTC TCTCTCAACT CTCAATACAT GCAGATAAAG CATTCTTACG TCGCTTATTC
GCGATCGCGC TACCAATTAC ACTGCAAAGC ATGATGTTTT CTAGCCGAAG CCTCGTCGAT
GTGCTTATGC TCGGCCAACT TGGTGAAGCT GAAATAGCCG CTGTTGGGGT AGCGGCGCGC
GCGACGTTTG TTACTACCAT CATGTTAGTT GGGGTGACGA CGGGTGGTGC ATTACTGACC
GCACAATATT GGGGGGCAGG CGATAAAGTC GGGGTACGTC GCAGTACCGC TTTAACATGG
ATGATAGCCA TGGTGTTTGC CGCCATTGCC GTTGCTTTGT TTGTTATTTT CCCACAGCCA
GTCATGAAAC TGACTACAGA CTCACAAGAA GTGATTGAGT TAGGGGCCAG CTATCTAATT
ATTTCATCCG TTAGCATGTT TGCTGTTGCG TGTGTCGCTA GTATGTCGGT GGGGTTGAGA
GCGATGCACC AACCGGGGCT GAGCACATTT TTTAGTGGTA TAGGCATTCT GTCTAATGTT
TTCCTCAACT GGGTGTTAAT TTTTGGTCAC TTAGGTTTTC CTGCTTTAGG GATTACAGGG
GCAGCCATTG CAACGGTTAG CAGTGGCGCT ATCGAAGTCG GTTGTCTATT TGGCTATTTA
TGGCTGAAGA AACACATAAT TGCATTTGGT TGGGATGATA TACGCGCAGG TTTGGTTTTA
GACAAAATAA CGCGTTTCTT GAGCCTTTCC TTACCGACCA CATTTAACTT TTTGGCATGG
GCTGGTGGAT TGTTCGCTTA CCATGCCATC ATGGGGCAAG CGGGTGTGCA AGGTTTGGCA
GCGTTGTCGG TGATGACGCC CGTTGAGTCA ATCGCTCTCG CTATGATGAT TGGCCTATCG
AATGCAGCTG CGGTTTTAGT GGGTAACCAA CTCGGCGCGA AAAACTTTGA ACCTGTGTAT
TACCAAGCTT GGGCTACGGT CATTTTGAAT GTGTTTATCG CATTTGTGGT CGCTGTTGTA
TTGATAGTGT CCAATCAATG GATCCTTAAT GCGTTTAGTG CACTGACAGC GGATACTCGC
CAGTTAGCTG AACAGTTTTT GGTGATTCTT GCTTTAGGTG TCGTACTACG CTCGGTGCCG
ATGATGGTCA TTGTTGGGAT ATTACGTGCA GGTGGTGACG TTAAGTTTTG TTTGTATCAA
GACATTCTTG CGCAGTGGGT GATCGGGATT CCACTCGCGG CATTTGCAGC GATTCAGCTC
GGTTGGGACC CACAATGGGT TTACTTACTC TTTTTGACCG AGGAAGTTGT GAAGTGGACG
ATTTGTCTGC CAAGAATGGT GAGCCGAAAA TGGATGAAAA ACCTTATCGG TCAATAG
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| Protein sequence | MTFLSQLSIH ADKAFLRRLF AIALPITLQS MMFSSRSLVD VLMLGQLGEA EIAAVGVAAR
ATFVTTIMLV GVTTGGALLT AQYWGAGDKV GVRRSTALTW MIAMVFAAIA VALFVIFPQP
VMKLTTDSQE VIELGASYLI ISSVSMFAVA CVASMSVGLR AMHQPGLSTF FSGIGILSNV
FLNWVLIFGH LGFPALGITG AAIATVSSGA IEVGCLFGYL WLKKHIIAFG WDDIRAGLVL
DKITRFLSLS LPTTFNFLAW AGGLFAYHAI MGQAGVQGLA ALSVMTPVES IALAMMIGLS
NAAAVLVGNQ LGAKNFEPVY YQAWATVILN VFIAFVVAVV LIVSNQWILN AFSALTADTR
QLAEQFLVIL ALGVVLRSVP MMVIVGILRA GGDVKFCLYQ DILAQWVIGI PLAAFAAIQL
GWDPQWVYLL FLTEEVVKWT ICLPRMVSRK WMKNLIGQ
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