| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003769 |
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| Symbol | |
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| ID | 8557504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2393024 |
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| End bp | 2395477 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406866 |
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| Product | ABC-type antimicrobial peptide transport system permease component |
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| Protein accession | YP_003286394 |
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| Protein GI | 262394540 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.660506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATGGC CCGTAGTTAA GGCACTACTC GGTCATTACC GTCGTTACCC ACTACAAATT
ATTCTTGTCT GGCTAGGGTT AACCTTAGGC GTGTCCCTTC TTGTTGGTGT TACTTCTATC
AATCAGCATG CAAAACAAAG TTATGCGACA GGAGAAAAGC TTTTCTCCAA TCCTTTGCCA
TACCGAATCC GAACTAAACA CTCTGCCAAT AAAATTCCTC AAGGTTTCTA TATCCAGTTG
CGCCGAGCTG GGTTTAACCA ATGTGCGCCG TTTGACGTGC TGCATCTAGA TGCTAAAACC
GACATGAGCT TGATGCTGGT GGGGATTGAT CCTGTCGCGA TGATTCCATT GCAGCAAGGC
AAATCTTTGG GTGAGATGCC CGTTCTATCA TTAATGAAAC CTCCTTATCC CATTCTAGTC
AGTCAAGATT TGGCCGCTTA CATGAGTTGG CAGGATGGGG ACTTTATTGA GATGAATGAC
GGAAGTCGTC TCGGACCGAT TCAAGTCGAT AAAAACAAAA TGCTCTCTGG GACTCGGCTG
GTTACCGACA TCTCATTACT GCGTATGCTC AAGCGGAGCT CAGGTTTGTC TGCGATTTCT
TGTGGTGAAA TGCCAGAGGA AAAACTAATA GCACTGAAAA ACATGCTTCC CAATGGCATG
ACGCTCGTTA GGAATACGCG TACGGAGCTT GAGTCGTTAA CTAATGCATT CCACATGAAT
CTCACTGCGA TGGGGATGCT GTCATTTTTG GTCGGGTTGT TTATTTTTTA TCAAGCGATG
TCTTTGTCAT TTATTCAGCG ACAACGTTTG GTGGGTATTT TGAGACAGAC GGGGGTCAAC
GGAACGCAGT TGGCTCAAGC ATTGTTGTTA GAGTTGTCGT TGCTCGTCTT TATTGCGTGG
GCGTGTGGTA ACTTTTTTGG TTTGATCTTG GCAAATGAAC TGATCCCTGC AGTCTCATCG
AGCCTGAGCG ATTTGTACGA TGCCAACGTA GGTTTAACAA TAGGATGGTC TTGGCAGTCC
AGCTTATATA GTCTGATCAT GGCAGCGATG GGCGCATTAA TATCGTGTTT GTGGCCATTG
ATTCGTTTGT TGAAGTCACA GCCAATTCGT CTATCTTCTC GACTGTCATT AATGCGATTT
GCAGGGCGTG AGTTCTCTTG GCAGGCTCTT GCTGCGTGTG CGTTTTGTGT CGCGGCAATC
GCAGTGTATC AAGCACCGAA AACACAAGAA ACTGGCTTTG CCATTATTGC GCTGATGTTG
GTTAGTGTGG CCTTGTTCAT GCCATTTATT ATGTGGCATA TGTTCCAGAG CTTTTCTTAC
ACCATGCGTT GGGTACGTGT ACGTTGGTTT TTTGCCGATG CGGCTGCGAG CATGAGTTAT
CGCGGTGTGG CAACAATGGC GTTTATGTTG GCACTGGCAG CAAACATCGG CGTAGAAACG
ATGGTAGGCA GCTTTAGGGA TACGACCGAT AAATGGCTGA GCCAGCGATT AGCAGCGGAT
ATTTATATCT ATCCGACAAA TAACTCAGCA GCTCGGATGA GTGCGTGGCT GCAAAACCAA
CCAGAAGTCA ACTCGGTTTG GTGGCGTTGG GAAAAAGATA TGCCAACCGA ACATGGTGCC
TTGCAAGTGG TGAGTACAGG CTCTTCTGAA GGTGAGCTAG ATGCACTGAC GGTAAAGCTA
GGTGTCCCGA ATTACTGGTA TCAACTGCAC GCGACCAAGA GCTTGATGGT GAGTGAATCG
ATGGCCTTGA AGTTGGATAT TCGCCCAGGA GACTTCATTA ACTTACAGGA GCCACTGGGT
GGAGACTGGC AAGTCGTCGG TGTTTATTAC GATTATGGAA ACCCGTATAA CCAGGTGATG
ATGTCGCACC GGAATTGGCT GTATGCATTT GCAGGGACGG GCAATGTTGG CCTTGGCGTG
GTGTTAAAAG ATAGTGTCAA TGGGGAGGGG CTGAAAAATC GCTTAGAAAA TGTATTCCGC
CTCCCGCAAG ACCGTGTGTT TGATAATGGT AATATTTATA GTCAGGCAAT GAGGGTATTT
GATCATACCT TCGCTATTGC AGGAACCTTG GGCAACATCA CGCTGATTAT TGCTGTGTTT
GGCTTATTCT TCGCGACATT GGCGGGCGAG TTGTCGCGGC AGCGGCACTT CTCTTTGCTG
AGATGTATGG GGGTATCCGG AAAGGAACTT GTCGCATTAG GTGGTTTGCA GTTGTTTGTC
TTCGGGGCCA TTTCCGCAAT TATTGCGGTG CCACTTGGTC TGGCACTTGC ACACTTGATC
GTTGATATTA TCATTAAGCA ATCATTCGGC TGGTCTCTGG AGCTTCAAAC GATCCCTTGG
GAATACGCTC AAACTATTGC TTGGGCGATG CTTGCCATCA TGATTGCTGG CGCATTGCCA
GTTATTAGAA TGATTAAGAG TACGCCAATG AAGTCATTAA GGGATGCGTT GTAA
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| Protein sequence | MLWPVVKALL GHYRRYPLQI ILVWLGLTLG VSLLVGVTSI NQHAKQSYAT GEKLFSNPLP
YRIRTKHSAN KIPQGFYIQL RRAGFNQCAP FDVLHLDAKT DMSLMLVGID PVAMIPLQQG
KSLGEMPVLS LMKPPYPILV SQDLAAYMSW QDGDFIEMND GSRLGPIQVD KNKMLSGTRL
VTDISLLRML KRSSGLSAIS CGEMPEEKLI ALKNMLPNGM TLVRNTRTEL ESLTNAFHMN
LTAMGMLSFL VGLFIFYQAM SLSFIQRQRL VGILRQTGVN GTQLAQALLL ELSLLVFIAW
ACGNFFGLIL ANELIPAVSS SLSDLYDANV GLTIGWSWQS SLYSLIMAAM GALISCLWPL
IRLLKSQPIR LSSRLSLMRF AGREFSWQAL AACAFCVAAI AVYQAPKTQE TGFAIIALML
VSVALFMPFI MWHMFQSFSY TMRWVRVRWF FADAAASMSY RGVATMAFML ALAANIGVET
MVGSFRDTTD KWLSQRLAAD IYIYPTNNSA ARMSAWLQNQ PEVNSVWWRW EKDMPTEHGA
LQVVSTGSSE GELDALTVKL GVPNYWYQLH ATKSLMVSES MALKLDIRPG DFINLQEPLG
GDWQVVGVYY DYGNPYNQVM MSHRNWLYAF AGTGNVGLGV VLKDSVNGEG LKNRLENVFR
LPQDRVFDNG NIYSQAMRVF DHTFAIAGTL GNITLIIAVF GLFFATLAGE LSRQRHFSLL
RCMGVSGKEL VALGGLQLFV FGAISAIIAV PLGLALAHLI VDIIIKQSFG WSLELQTIPW
EYAQTIAWAM LAIMIAGALP VIRMIKSTPM KSLRDAL
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