Gene VEA_003767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003767 
Symbol 
ID8557502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2390419 
End bp2391570 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content45% 
IMG OID646406864 
ProductNa+/H+ antiporter NhaA type 
Protein accessionYP_003286392 
Protein GI262394538 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATG TCATTCGTGA CTTTTTCAAA ATGGAATCAG CTGGTGGTAT TCTTCTCGTG 
ATTGCCGCGG CAATTGCGAT GACCATTGCT AACTCACCGC TGGGCGAAAC TTATCAATCT 
GTACTGCATA CTTATGTATT TGGTATGTCA GTTTCTCACT GGATTAATGA CGGCCTAATG 
GCTGTTTTCT TCTTACTCAT TGGCCTTGAA GTTAAGCGAG AGCTACTTGA AGGTGCGTTA 
AAATCAAAAG AAACCGCAAT TTTCCCTGCG ATTGCAGCGG TTGGCGGTAT GTTAGCTCCT 
GCTCTTATTT ACGTAGCCTT TAATGCCAAC GATCCTGAGG CGATTTCTGG TTGGGCAATT 
CCAGCGGCGA CAGATATCGC TTTTGCTTTA GGTATCATGG CGTTATTAGG TAAGCGTGTA 
CCAGTAAGCC TAAAAGTGTT CTTGCTAGCG CTTGCTATCA TCGATGATTT GGGTGTGGTT 
GTTATTATCG CGCTATTTTA CACCGGTGAC CTGTCGACCA TGGCGTTGCT TGTTGGCTTC 
ATCATGACTG GTGTCCTATT CATGTTGAAT GCGAAGGAAG TAACAAAACT TACGCCATAC 
ATGATCGTCG GTGCGATCTT ATGGTTCGCG GTGCTTAAAT CTGGTGTTCA CGCAACATTG 
GCAGGTGTAG TGATTGGTTT TGCTATCCCA CTAAAGGGAA AGCAGGGCGA ACATTCTCCA 
CTTAAACATA TGGAGCACGC GCTTCACCCA TACGTGGCAT TTGGTATTCT GCCTCTATTC 
GCATTTGCCA ATGCGGGGAT TTCGTTAGAA GGCGTATCGA TGTCAGGTCT GACTTCAATG 
CTGCCACTCG GTATTGCTTT GGGTCTACTG GTTGGTAAGC CTCTAGGTAT CTTTACCTTT 
AGCTGGGCAG CGGTAAAAAT GGGCGTTGCT AAGTTACCTG AAGGGGTTAA CTTCAAGCAT 
ATCTTTGCGG TATCTGTGTT GTGTGGTATT GGCTTTACAA TGTCTATCTT CATTTCCTCT 
TTAGCGTTCG GAAATGTAAG TCCTGAATTT GATACCTATG CTCGACTAGG CATCTTAATG 
GGTTCGACGA CAGCAGCATT ACTTGGCTAT GCCTTACTGC ACTTTTCTTT GCCTAAGAAA 
GCGCAAGCGT AA
 
Protein sequence
MNDVIRDFFK MESAGGILLV IAAAIAMTIA NSPLGETYQS VLHTYVFGMS VSHWINDGLM 
AVFFLLIGLE VKRELLEGAL KSKETAIFPA IAAVGGMLAP ALIYVAFNAN DPEAISGWAI 
PAATDIAFAL GIMALLGKRV PVSLKVFLLA LAIIDDLGVV VIIALFYTGD LSTMALLVGF 
IMTGVLFMLN AKEVTKLTPY MIVGAILWFA VLKSGVHATL AGVVIGFAIP LKGKQGEHSP 
LKHMEHALHP YVAFGILPLF AFANAGISLE GVSMSGLTSM LPLGIALGLL VGKPLGIFTF 
SWAAVKMGVA KLPEGVNFKH IFAVSVLCGI GFTMSIFISS LAFGNVSPEF DTYARLGILM 
GSTTAALLGY ALLHFSLPKK AQA