| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003766 |
|---|
| Symbol | |
|---|
| ID | 8557501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2389052 |
|---|
| End bp | 2389696 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646406863 |
|---|
| Product | predicted transcriptional regulator for fatty acid degradation FadQ TetR family |
|---|
| Protein accession | YP_003286391 |
|---|
| Protein GI | 262394537 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCGA GAACATCAAC AAAAGAAAAA ATACTCGATG TCGCAGAAGG ACTCTTTGCT
GAACATGGTT TTAATGATAC TTCGCTAAGA ACGATAACAG GTAAAGCGAA CGTCAACTTA
GCATCGGTAA ATTATCACTT TGGCGATAAA AAAACGCTAG TTAGAGCGGT TTTAGATAGA
TACCTAGAAG CGCTCATGCC GAGCATTAAA ACCTCACTAA TTGAGTTAAA TACGCGTGAT
AGCTACGACA TGGACGACGT CTTTGAGTCA TTGCGTTTAC CTTTGCGTAC ATTAAATGAT
GTACGCCCAA ATGGTACTGC GCTGTTTATG TTGTTAATTG GCCGCGGTTA TACAGACGTT
CAAGGTCATC TACGCTGGTT CATTACCACC AGATACGAAG AGGTACTGAA CCTTTTCACT
TTCTCGATAA TGAAGGCAAA CCCGGAACTA TGTGAGGAGC AGCTGTTTTG GCGACTGCAC
TTCACGCTAG GTACCTGCGT ATTTACGATG GCTTCAAGCC AGGCTCTTTC GGAGCTTGCT
GAAAGTAAAT TTGAAAAGGA AGTCGATGTG AAATCTGTCG TCGATTTGCT GATTCCTTAT
TTGTCAGCAG GAATGTCAGC GAAGCAGTTG GCACAAGACA AATAA
|
|---|
| Protein sequence | MAPRTSTKEK ILDVAEGLFA EHGFNDTSLR TITGKANVNL ASVNYHFGDK KTLVRAVLDR
YLEALMPSIK TSLIELNTRD SYDMDDVFES LRLPLRTLND VRPNGTALFM LLIGRGYTDV
QGHLRWFITT RYEEVLNLFT FSIMKANPEL CEEQLFWRLH FTLGTCVFTM ASSQALSELA
ESKFEKEVDV KSVVDLLIPY LSAGMSAKQL AQDK
|
|---|
| |