Gene VEA_003765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003765 
Symbol 
ID8557500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2386707 
End bp2388989 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content47% 
IMG OID646406862 
Productacyl-CoA dehydrogenase short-chain specific 
Protein accessionYP_003286390 
Protein GI262394536 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.392288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCTC TACGAAGAAA ATGGATTAGT GACCCAGCTT TTAAAGTGTT CAAAAAAGTA 
TTGCCACCTC TCTCTAGCAC CGAGAAAGAG GCGATGGAAG CGGGTAGTGT GTGGTGGGAT
GCCGAACTAT TTTCAGGCAA GCCTAACTTC ACTACATTGC ACCATTATCC AACGCCGACA
CTGACAGCAG AAGAGCAGTC ATTTATGGAT AATGAGCTTG AAACCCTTCT AGAAATGCTT
GATGACCAGA AGATTGTCAA AGAAGACAGG GATTTACCGC CTGAAGTATG GGAGTACTTA
CGTAAAGAGC GATTTTTCTC ACTGATCATT TCAAAAGCGT ATGGTGGTCG TGAATTTTCC
GCTTTAGCGA ACTCAACCAT TGTTTCTCGT ATTGCGACTC GAAGTATCAG TACCGCGGTA
TCGGTAATGG TACCGAACTC TCTTGGTCCA GGTGAGCTTT TATCGCACTA TGGCACGCAA
GAGCAAAAAG ATTACTGGTT GCCTCGTCTT GCTGATGGTA CCGACATTCC TTGTTTTGCA
TTAACAGGGC CCGAAGCGGG ATCTGACGCC GGTGGTATAC CAGATCAAGG CGTAGTTTGT
TATGGCACTC ACGAAGGCAA AGAAGTGCTT GGCGTGCGAG TTAGCTGGAA TAAACGCTAC
ATCACACTTG CGCCAGTGGC GACAGTGCTC GGATTAGCAT TTAAGCTACA GGATCCAGAA
GGGCTACTTG GTGATAAGAA AGAGGTTGGA ATCACATGTG CGCTGATCCC CGCTGACCAT
GAAGGTGTCG AGATAGGCGA GCGCCATGAT CCTCTGGGTT CTGCATTCAT GAATGGTCCG
ACTCGTGGTG AAGATGTCTT CATCCCTATG GACTGGTTGA TCGGTGGCGC TGATTACGCA
GGTAAAGGTT GGCGTATGCT GGTTGAGTGT CTTTCTGCTG GTCGTGGTAT CTCTCTCCCA
GCGCTTGGCA CAGCGATTGG CCACCTTACT ACACGTACAA CCGGTGCTTA TGCTTACGTA
CGTAAACAGT TTGGTATGTC GATCGGTAAG TTTGAGGGTG TCGCAGAAGC TATGGGGCGT
ATTGGTGGCC TTACTTATCT ACTAGAAGCA ACACGTACGC TGACGACGAC TTCTCTCGAT
ATGAAAGAAA AACCTGGGAT TGTAACCGCG ATTGCCAAGT ACCACATGAC GGAAATTGCG
CGTACTATTC TAAATGATTC GTTTGATATT CATGCAGGTC GTGCGATTCA AGATGGCCCA
ATGAACTATC TTGCTAAACA CTATCTCGGT ATCCCAGTTG CGATCACTGT TGAAGGCGCG
AATATTCTGA CTCGTAACCT GATGATATTT GGTCAAGGTG CGACTCGTTG TCACCCATAT
GTACTGAAAG AAATGGAAGC CGCGGCGAAT CCAGATTCTG AACAAGGGGC GAAAGAATTT
GACAACTTGC TCTTTAAACA CATCAAACAT GCGGTAGGCA ATACATTTGG TGCATTTGGC
GCGGCGCTAA CTGGTTCTCG GTTTGTAAAA GCGCACATGA GTGGCCCAAC ACAGCAGTAC
TATAAAGAAA TCACAAGATT AAGCCGAGCG CTTGCCGTTA GTGCTGACTT CGCGATGTTA
ACACTAGGCG GTGATTTGAA GCGTAAAGAA ATGATTTCCG CACGTCTGGG TGATGGCTTA
AGTTATCTAT ATATGGCGTC TGCCGCACTG AAAAAGTATG AAGATGAAGG ACGTCAACAA
GGCGATCTAG ATTTTGTCCA CTACGCCGTG CAACATTGTT TGTATAACGC ATCTAAGTCA
TTAAATGAGG CTTATACCAA CTTCCCTGTG AAATACGTTG GCGGTGTGCT GAAAGGGTTA
TTGTTCCCAC TTGGTAATCA TTTTAATAAG CCAAGCGATG AACTGTGTGT GAATCTGGCG
GAAGCGATGA TGACGCCAGG AGCACAACGT GATCGACTCA CGCATCTTTG CTACATCGGA
AAATCCGACG ACGACAGCGT AGGCTTAATG GAGAATGCCT TCCTCGCAAT GTACGAAATC
AAACCATTAG AGCGTAAGCT TATGAAGGCG GCGAAGGATG GGAAAGTGGC TCGTAAAGGT
CTTTTACACG ACCGTTTGCA GCAAGCATTT GAAGCTGGCG TGTTAACTGA GCAAGAAATT
GACCAAATAA TGGCGGCAGA CAAATTGCGT TACAAGGCGA TTCAAGTTGA CCACTTTAGT
CATGACTTTT CTGAAGTACG AACCGATTGC CCAAAAAAGT CGCATTTGAA CCCGGCGGCA
TAG
 
Protein sequence
MSSLRRKWIS DPAFKVFKKV LPPLSSTEKE AMEAGSVWWD AELFSGKPNF TTLHHYPTPT 
LTAEEQSFMD NELETLLEML DDQKIVKEDR DLPPEVWEYL RKERFFSLII SKAYGGREFS
ALANSTIVSR IATRSISTAV SVMVPNSLGP GELLSHYGTQ EQKDYWLPRL ADGTDIPCFA
LTGPEAGSDA GGIPDQGVVC YGTHEGKEVL GVRVSWNKRY ITLAPVATVL GLAFKLQDPE
GLLGDKKEVG ITCALIPADH EGVEIGERHD PLGSAFMNGP TRGEDVFIPM DWLIGGADYA
GKGWRMLVEC LSAGRGISLP ALGTAIGHLT TRTTGAYAYV RKQFGMSIGK FEGVAEAMGR
IGGLTYLLEA TRTLTTTSLD MKEKPGIVTA IAKYHMTEIA RTILNDSFDI HAGRAIQDGP
MNYLAKHYLG IPVAITVEGA NILTRNLMIF GQGATRCHPY VLKEMEAAAN PDSEQGAKEF
DNLLFKHIKH AVGNTFGAFG AALTGSRFVK AHMSGPTQQY YKEITRLSRA LAVSADFAML
TLGGDLKRKE MISARLGDGL SYLYMASAAL KKYEDEGRQQ GDLDFVHYAV QHCLYNASKS
LNEAYTNFPV KYVGGVLKGL LFPLGNHFNK PSDELCVNLA EAMMTPGAQR DRLTHLCYIG
KSDDDSVGLM ENAFLAMYEI KPLERKLMKA AKDGKVARKG LLHDRLQQAF EAGVLTEQEI
DQIMAADKLR YKAIQVDHFS HDFSEVRTDC PKKSHLNPAA