Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003765 |
Symbol | |
ID | 8557500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2386707 |
End bp | 2388989 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646406862 |
Product | acyl-CoA dehydrogenase short-chain specific |
Protein accession | YP_003286390 |
Protein GI | 262394536 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.392288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCTC TACGAAGAAA ATGGATTAGT GACCCAGCTT TTAAAGTGTT CAAAAAAGTA TTGCCACCTC TCTCTAGCAC CGAGAAAGAG GCGATGGAAG CGGGTAGTGT GTGGTGGGAT GCCGAACTAT TTTCAGGCAA GCCTAACTTC ACTACATTGC ACCATTATCC AACGCCGACA CTGACAGCAG AAGAGCAGTC ATTTATGGAT AATGAGCTTG AAACCCTTCT AGAAATGCTT GATGACCAGA AGATTGTCAA AGAAGACAGG GATTTACCGC CTGAAGTATG GGAGTACTTA CGTAAAGAGC GATTTTTCTC ACTGATCATT TCAAAAGCGT ATGGTGGTCG TGAATTTTCC GCTTTAGCGA ACTCAACCAT TGTTTCTCGT ATTGCGACTC GAAGTATCAG TACCGCGGTA TCGGTAATGG TACCGAACTC TCTTGGTCCA GGTGAGCTTT TATCGCACTA TGGCACGCAA GAGCAAAAAG ATTACTGGTT GCCTCGTCTT GCTGATGGTA CCGACATTCC TTGTTTTGCA TTAACAGGGC CCGAAGCGGG ATCTGACGCC GGTGGTATAC CAGATCAAGG CGTAGTTTGT TATGGCACTC ACGAAGGCAA AGAAGTGCTT GGCGTGCGAG TTAGCTGGAA TAAACGCTAC ATCACACTTG CGCCAGTGGC GACAGTGCTC GGATTAGCAT TTAAGCTACA GGATCCAGAA GGGCTACTTG GTGATAAGAA AGAGGTTGGA ATCACATGTG CGCTGATCCC CGCTGACCAT GAAGGTGTCG AGATAGGCGA GCGCCATGAT CCTCTGGGTT CTGCATTCAT GAATGGTCCG ACTCGTGGTG AAGATGTCTT CATCCCTATG GACTGGTTGA TCGGTGGCGC TGATTACGCA GGTAAAGGTT GGCGTATGCT GGTTGAGTGT CTTTCTGCTG GTCGTGGTAT CTCTCTCCCA GCGCTTGGCA CAGCGATTGG CCACCTTACT ACACGTACAA CCGGTGCTTA TGCTTACGTA CGTAAACAGT TTGGTATGTC GATCGGTAAG TTTGAGGGTG TCGCAGAAGC TATGGGGCGT ATTGGTGGCC TTACTTATCT ACTAGAAGCA ACACGTACGC TGACGACGAC TTCTCTCGAT ATGAAAGAAA AACCTGGGAT TGTAACCGCG ATTGCCAAGT ACCACATGAC GGAAATTGCG CGTACTATTC TAAATGATTC GTTTGATATT CATGCAGGTC GTGCGATTCA AGATGGCCCA ATGAACTATC TTGCTAAACA CTATCTCGGT ATCCCAGTTG CGATCACTGT TGAAGGCGCG AATATTCTGA CTCGTAACCT GATGATATTT GGTCAAGGTG CGACTCGTTG TCACCCATAT GTACTGAAAG AAATGGAAGC CGCGGCGAAT CCAGATTCTG AACAAGGGGC GAAAGAATTT GACAACTTGC TCTTTAAACA CATCAAACAT GCGGTAGGCA ATACATTTGG TGCATTTGGC GCGGCGCTAA CTGGTTCTCG GTTTGTAAAA GCGCACATGA GTGGCCCAAC ACAGCAGTAC TATAAAGAAA TCACAAGATT AAGCCGAGCG CTTGCCGTTA GTGCTGACTT CGCGATGTTA ACACTAGGCG GTGATTTGAA GCGTAAAGAA ATGATTTCCG CACGTCTGGG TGATGGCTTA AGTTATCTAT ATATGGCGTC TGCCGCACTG AAAAAGTATG AAGATGAAGG ACGTCAACAA GGCGATCTAG ATTTTGTCCA CTACGCCGTG CAACATTGTT TGTATAACGC ATCTAAGTCA TTAAATGAGG CTTATACCAA CTTCCCTGTG AAATACGTTG GCGGTGTGCT GAAAGGGTTA TTGTTCCCAC TTGGTAATCA TTTTAATAAG CCAAGCGATG AACTGTGTGT GAATCTGGCG GAAGCGATGA TGACGCCAGG AGCACAACGT GATCGACTCA CGCATCTTTG CTACATCGGA AAATCCGACG ACGACAGCGT AGGCTTAATG GAGAATGCCT TCCTCGCAAT GTACGAAATC AAACCATTAG AGCGTAAGCT TATGAAGGCG GCGAAGGATG GGAAAGTGGC TCGTAAAGGT CTTTTACACG ACCGTTTGCA GCAAGCATTT GAAGCTGGCG TGTTAACTGA GCAAGAAATT GACCAAATAA TGGCGGCAGA CAAATTGCGT TACAAGGCGA TTCAAGTTGA CCACTTTAGT CATGACTTTT CTGAAGTACG AACCGATTGC CCAAAAAAGT CGCATTTGAA CCCGGCGGCA TAG
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Protein sequence | MSSLRRKWIS DPAFKVFKKV LPPLSSTEKE AMEAGSVWWD AELFSGKPNF TTLHHYPTPT LTAEEQSFMD NELETLLEML DDQKIVKEDR DLPPEVWEYL RKERFFSLII SKAYGGREFS ALANSTIVSR IATRSISTAV SVMVPNSLGP GELLSHYGTQ EQKDYWLPRL ADGTDIPCFA LTGPEAGSDA GGIPDQGVVC YGTHEGKEVL GVRVSWNKRY ITLAPVATVL GLAFKLQDPE GLLGDKKEVG ITCALIPADH EGVEIGERHD PLGSAFMNGP TRGEDVFIPM DWLIGGADYA GKGWRMLVEC LSAGRGISLP ALGTAIGHLT TRTTGAYAYV RKQFGMSIGK FEGVAEAMGR IGGLTYLLEA TRTLTTTSLD MKEKPGIVTA IAKYHMTEIA RTILNDSFDI HAGRAIQDGP MNYLAKHYLG IPVAITVEGA NILTRNLMIF GQGATRCHPY VLKEMEAAAN PDSEQGAKEF DNLLFKHIKH AVGNTFGAFG AALTGSRFVK AHMSGPTQQY YKEITRLSRA LAVSADFAML TLGGDLKRKE MISARLGDGL SYLYMASAAL KKYEDEGRQQ GDLDFVHYAV QHCLYNASKS LNEAYTNFPV KYVGGVLKGL LFPLGNHFNK PSDELCVNLA EAMMTPGAQR DRLTHLCYIG KSDDDSVGLM ENAFLAMYEI KPLERKLMKA AKDGKVARKG LLHDRLQQAF EAGVLTEQEI DQIMAADKLR YKAIQVDHFS HDFSEVRTDC PKKSHLNPAA
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