| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003745 |
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| Symbol | |
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| ID | 8557480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2363599 |
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| End bp | 2365386 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406842 |
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| Product | transport ATP-binding protein CydD |
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| Protein accession | YP_003286370 |
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| Protein GI | 262394516 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.988439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA AAAAGCAAAG CAGCTTGAAT AAGTGGCTGA AGCAACAAAG TAAGTTAGCC
AAGCGCTGGC TTATGATTGC GATAGGCCTA GGCGTACTTT CAAGCGTGTT TTTATTGGCT
CAAGCAGCCC TGCTCGCCTC CATTCTGCAC CAGTTAATCA TTGACCAAGT AGACAAAGCC
GACCTCATTT GGCATTTTGT TGGGCTTGGT GGCACGGTTA TCGGTCGAGC TACTTGTACC
TGGGGTCGAG AGCTTGCCGG TTACCGTTGC GGTGAGCAAA TTCGAGTTTA TATTCGCCAA
CTCATTTTAG ATAAAGTTCA TAAACTTGGG CCAGCTTACA TCAAAGGCAA ACCTGCCGGC
AGCTGGGCGA CGCTCATCTT AGAGCAGGTA GAAGATATGC AAGATTTCTT CTCTCGCTAC
TTGCCTCAGA TGTCATTATC GGTACTAGTG CCTTTCATTA TTTTGGTTGT CGTATTCCCA
GTAAACTGGG CGGCAGGCTT GATCTTCCTA GTCACTGCAC CACTGGTGCC TATTTTCATG
GCACTGGTTG GGATGAAAGC CGCAGAAGCA AACCGCAAAA ACTTTAAAGC GATGCAGCGT
TTGTCCGGTC ACTTTTATGA CCGCTTGCAA GCAATGACGA CCATTCGCTT ATTCGATAGA
ACAAAATCTG AAACTGAAAC TCTGAAGGGT GCTTCGGAAG TCTTTCGTAC TCGTACCATG
GACGTTCTGA AAATCGCGTT TCTATCTTCT GCGGTTTTAG AGTTTTTCAC TTCCATTTCT
ATCGCAATTA CCGCCGTCTA CTTTGGCTTT AGTTATATCG GAGAGCTCGA TTTCGGCTAC
TACGGCACAG GTGTTACGCT GTTTGCTGGC TTGTTCATTC TGATTCTTGC GCCAGAGTTT
TATCAGCCAT TACGTGATTT GGGCACGTTC TACCATGCGA AACAGCAAGC GGTTGGCGCA
GCAGAAAGTA TTGTCGAGTT TCTAGATTTG GAAGTCGATC AAATCAAAGA TGGAACCCAA
GCGTTAGATA AAAACAGCCC TATCCATATT GAAGCAGACG AGTTAACCAT TTTTAGTCCG
GAAGGTAAGC AGCTCGCAGG TCCCCTATCC TTCTCTCTTG AAGCCAACAA AAGTACGGCT
TTAGTTGGAC CAAGTGGTGC AGGTAAAACA AGCTTGGTAA ACACCATCCT CGGTTTCATG
CCTTATCAAG GTAGCTTGAA GATTAATGGT TGTGAATTGT CACAACTGGA TCTAGCCACA
TGGCGAGAGG CCGTAAGCTG GATTGGTCAA AACCCAATGC TATTACATGG CAGCATTCGA
GATAACGTCA CGTTAGGCAA ACACAACATT CAAGATGCAG ACGTTCATTC TGTTTTGAAT
GACTCTCATG CTGCTGAATT TGTTGAAATG CATGGGTTGG ATTACCCGAT ATCTGACCGC
TCTGGTGGTT TATCTGTCGG TCAAGCCCAG CGTTTAGCGT TGGCTCGCGC TATGCTACAA
AATGGTCGTT TTTGGTTATT AGATGAACCG ACCGCAAGCT TAGATGCTCG TAGTGAAAAA
CTCGTCATGG AAGGCATTAA CAAGTACGCA CATGCCACAA CGAATTTGAT AATTACTCAC
CAGTTGGCAC CTTTACAAAG CGTATCGCAA ATTCTTGTTA TGCAGGACGG CCAGATTGTT
CAATGTGGTG ATTACGACAC ACTGTCGACA GAAGATGGCT TATTTAAAGA CATGTTGGAA
GCGAACCTCG CACAACGTGA AACAGACAAG GGGAACTTAG ATGCGTGA
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| Protein sequence | MDKKKQSSLN KWLKQQSKLA KRWLMIAIGL GVLSSVFLLA QAALLASILH QLIIDQVDKA
DLIWHFVGLG GTVIGRATCT WGRELAGYRC GEQIRVYIRQ LILDKVHKLG PAYIKGKPAG
SWATLILEQV EDMQDFFSRY LPQMSLSVLV PFIILVVVFP VNWAAGLIFL VTAPLVPIFM
ALVGMKAAEA NRKNFKAMQR LSGHFYDRLQ AMTTIRLFDR TKSETETLKG ASEVFRTRTM
DVLKIAFLSS AVLEFFTSIS IAITAVYFGF SYIGELDFGY YGTGVTLFAG LFILILAPEF
YQPLRDLGTF YHAKQQAVGA AESIVEFLDL EVDQIKDGTQ ALDKNSPIHI EADELTIFSP
EGKQLAGPLS FSLEANKSTA LVGPSGAGKT SLVNTILGFM PYQGSLKING CELSQLDLAT
WREAVSWIGQ NPMLLHGSIR DNVTLGKHNI QDADVHSVLN DSHAAEFVEM HGLDYPISDR
SGGLSVGQAQ RLALARAMLQ NGRFWLLDEP TASLDARSEK LVMEGINKYA HATTNLIITH
QLAPLQSVSQ ILVMQDGQIV QCGDYDTLST EDGLFKDMLE ANLAQRETDK GNLDA
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