Gene VEA_003692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003692 
Symbol 
ID8557427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2300321 
End bp2300995 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID646406789 
Productcobalamin synthase 
Protein accessionYP_003286317 
Protein GI262394463 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGG CTGGCCGTTA CTTCGCGTTA GTTGGTCTCG TGCTTGGAGC ACTTTGTGCT 
CTGGTATTTT CGCTCTCCTC AATTCTTTTC CCAGAATCGG TTGCCATAGT ATTAACGATG 
GTGTTTAGCT TATTGTTAAC AGGGGCATTT CACGAAGACG GCTTGACTGA TATGGCGGAT 
GGCATTGGCG GTGGCATGAC TGTCGAGCGA CGCCTCTCTA TTATGAAGGA CAGCCGCATT 
GGCACTTATG GTGCAGCCAC TCTCATTATG GCGTTATTGG CTAAGTATGT TTTTTGGAGT 
GAACTGGCTA ACTTGCCGCA GTTTTGGTTG GTCATTGTCG TCGCTTATAC CGCAAGCCGA 
GCACTAGCCG CGACGCTTAT TTATGACATG CCTTATGTCA GTGACAGTGA TACGTCGAAA 
AGTAAACCGC TGGCAAATAG CCAGTCTTCT TTAGAAGTCT CCATTTTGTT GTTTACTGGT 
GGCATAACAT TGCTTGTGCT TGGTATCACG CAGGCGATCT TTATATCGCT TGTTCTCGTG 
GTATTTCGTT TGATGTTCAA ACGTTGGTTA ACCAAGCGAA TTGGCGGATT TACGGGGGAT 
TGTCTTGGCG CAGCGCAGCA GCTATCGGAA CTGCTTGTTT ATCTCACTAT GATTGGGTTT 
TATCACATCT CATGA
 
Protein sequence
MNQAGRYFAL VGLVLGALCA LVFSLSSILF PESVAIVLTM VFSLLLTGAF HEDGLTDMAD 
GIGGGMTVER RLSIMKDSRI GTYGAATLIM ALLAKYVFWS ELANLPQFWL VIVVAYTASR 
ALAATLIYDM PYVSDSDTSK SKPLANSQSS LEVSILLFTG GITLLVLGIT QAIFISLVLV 
VFRLMFKRWL TKRIGGFTGD CLGAAQQLSE LLVYLTMIGF YHIS