Gene VEA_003486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003486 
Symbol 
ID8557219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2067946 
End bp2068677 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content44% 
IMG OID646406581 
ProductNAD-dependent protein deacetylase of SIR2 family 
Protein accessionYP_003286111 
Protein GI262394257 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.657573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCC CTTATAGAAA TATTGTAGTA CTTACTGGTG CAGGTATCTC GGCCGAATCT 
GGTATTCAAA CATTTCGTGC GCAAGATGGC CTTTGGGAGA ATCACCGTAT TGAAGATGTA
GCAACACCTG AAGGGTTTGC TCGCGATCCG GACCTTGTTC AAGACTTTTA CAACCAACGC
CGCAAGAAAC TTCAAGACAA TGCGATACAG CCGAATGCCG CGCATAAGGC ACTGGGCCGC
CTAGAAACCG AGTTAGAAGG TAAAGTGACG GTCATCACTC AAAATATAGA CAACCTTCAC
GAAAGAGGCG GCAGCCATAA CGTCATTCAT ATGCACGGTG AGCTTTTAAA AGCGAGATGC
AGTGAATCAA ACCAAGTTAT AGAACATAGT GAAGACATTA AGACTGGTGA GCTTTGTCAT
TGCTGTCAGA TCCCTTCACA AATGCGACCA CATATTGTTT GGTTTGGTGA AATGCCACTA
CGAATGGGGG ATATCTACGC AGCATTAGAA GAAGCAGATT TATTTATTTC TATCGGGACT
TCTGGCGTCG TATATCCCGC AGCAGGTTTT GTTCATGATG CAAAAATGCA TGGCGCACAT
ACTATTGAAA TTAACCTCGA GCCTAGTGCG GTAGAAAGTG AATTTGAGGA AAAACGCTAC
GGAAAAGCAA GCGTCGAGGT TCCAAAATTA GTTGACGAAA TACTGGCTCT AGAAGGAAAA
GAAAGAGCGT AA
 
Protein sequence
MNFPYRNIVV LTGAGISAES GIQTFRAQDG LWENHRIEDV ATPEGFARDP DLVQDFYNQR 
RKKLQDNAIQ PNAAHKALGR LETELEGKVT VITQNIDNLH ERGGSHNVIH MHGELLKARC
SESNQVIEHS EDIKTGELCH CCQIPSQMRP HIVWFGEMPL RMGDIYAALE EADLFISIGT
SGVVYPAAGF VHDAKMHGAH TIEINLEPSA VESEFEEKRY GKASVEVPKL VDEILALEGK
ERA