Gene VEA_003483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003483 
Symbol 
ID8557216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2064662 
End bp2065432 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content43% 
IMG OID646406578 
Productspermidine putrescine ABC transporter permease component PotC 
Protein accessionYP_003286108 
Protein GI262394254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000553951 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGCA CAGTTAGATT TAGCTTTATG GCGTTGGTTT ATGCATTTTT GTATCTGCCA 
ATCGTTGTAC TAATCGTAAA TTCATTTAAC GCCAATAAAT TTGGTATGAA ATGGGGTGGT
TTCACCACGA AATGGTATGA AACCCTAGTC AACAACGACA GCCTAATGCA GGCTGCATGG
CACTCATTGA ACGTGGCGGT ATTTTCTGCA ACAGCGGCTA CTATTATTGG TAGCTTAACA
GCGGTTGCCC TATTCCGTTA CTCGTTCAAA GGCAAAGGTG CTGTAAACGG CATGCTGTTT
GTCGTAATGA TGTCTCCAGA TATTGTCATG GCGATTTCAT TACTTGCTCT TTTCCTAGTA
TTAGGCGCAC AGCTGGGCTT CTTTACTCTA TTGATTGCCC ACATCACCTT CTGTTTGCCA
TTTGTGGTGG TAACCGTATA CAGCCGCTTA AATGGCTTCG ATGTGAAGAT GTTGGAAGCA
GCAAAAGATC TTGGCGCAAG TGAATGGGTT ATCTTAAAGC AGATCATCCT TCCTCTTGCA
AAACCAGCAG TTGCGGCAGG CTGGCTGCTT AGCTTTACCC TGTCTCTGGA CGACGTAATT
ATTAGTTCGT TCGTAACAGG TCCAACGTAT GAAATCCTAC CATTGAAAAT TTACTCGATG
GTTAAGGTGG GTATTTCACC GGAAGTGAAT GCTCTTGCAA CGGTCATGTT GGTGGTTTCT
TTAATTCTTG TCGTAATTTC TCAGTTGCTC GCAAGAGAAA AAGTAAAGTA A
 
Protein sequence
MGRTVRFSFM ALVYAFLYLP IVVLIVNSFN ANKFGMKWGG FTTKWYETLV NNDSLMQAAW 
HSLNVAVFSA TAATIIGSLT AVALFRYSFK GKGAVNGMLF VVMMSPDIVM AISLLALFLV
LGAQLGFFTL LIAHITFCLP FVVVTVYSRL NGFDVKMLEA AKDLGASEWV ILKQIILPLA
KPAVAAGWLL SFTLSLDDVI ISSFVTGPTY EILPLKIYSM VKVGISPEVN ALATVMLVVS
LILVVISQLL AREKVK