Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003479 |
Symbol | |
ID | 8557212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2060678 |
End bp | 2061391 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406574 |
Product | putative Bax protein |
Protein accession | YP_003286104 |
Protein GI | 262394250 |
COG category | [R] General function prediction only |
COG ID | [COG2992] Uncharacterized FlgJ-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000155833 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGTCCG GGACAATTAA GCATGTCGAT TTGTCTCATT TGCCACACAT TGGTGATATC CCTGACTTCA ACGCAATAAA AGACACCAAA GAGAAAAAAG CGGCGTTTTT TGATTTCTTA AGGCCTAAAA TAGCACTTGA GAATCAACGA ATTCGCCATG AACGAGCGTT TCTTACTTCT TTAAAGGTGG GACAAATCAC TCAAGAGCAA GAAGAGTACG CTCAGCGACT AGCGGCTCTG TATTCTTTGC CTTTGAGCGA CAACAAAGTC GATCACGCGT GGTTGGGTGA AATGCTTGTG CGAGTGAATG TCTTACCAGA AGCACTGGTT CTAACTCAAG CAGCAAATGA ATCTGCGTGG GGCACTTCTC GTTTTGCCAC TCAAGCGAAC AACTTGTTCG GCCAATGGTG TTATAAAAAG GGTTGTGGAA TTGTTCCTGC GCAACGTGGC GCAGGCAAAG CTCATGAAGT TGAAAAATTC GATTCTGTAC AGCAGTCGGT TCATGGCTAC TTTATGAATG TTAATCGAAA CCCAGCGTAT GCTGAACTGC GTGAAATCAG AGCTTCTCTA GCCGAAAAGA ACAAAGACCT GTTATCGGTC GCAACGGCGT CAGAGTTAAC TCATGGATTG CTAGCATATT CTGAACGTGG CATTGCTTAT GTACACGATC TTCGCGCTAT GATTCGTCAT AATAACGCCT ACTGGACACA ATAA
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Protein sequence | MLSGTIKHVD LSHLPHIGDI PDFNAIKDTK EKKAAFFDFL RPKIALENQR IRHERAFLTS LKVGQITQEQ EEYAQRLAAL YSLPLSDNKV DHAWLGEMLV RVNVLPEALV LTQAANESAW GTSRFATQAN NLFGQWCYKK GCGIVPAQRG AGKAHEVEKF DSVQQSVHGY FMNVNRNPAY AELREIRASL AEKNKDLLSV ATASELTHGL LAYSERGIAY VHDLRAMIRH NNAYWTQ
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