Gene VEA_003479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003479 
Symbol 
ID8557212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2060678 
End bp2061391 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content45% 
IMG OID646406574 
Productputative Bax protein 
Protein accessionYP_003286104 
Protein GI262394250 
COG category[R] General function prediction only 
COG ID[COG2992] Uncharacterized FlgJ-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000155833 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGTCCG GGACAATTAA GCATGTCGAT TTGTCTCATT TGCCACACAT TGGTGATATC 
CCTGACTTCA ACGCAATAAA AGACACCAAA GAGAAAAAAG CGGCGTTTTT TGATTTCTTA
AGGCCTAAAA TAGCACTTGA GAATCAACGA ATTCGCCATG AACGAGCGTT TCTTACTTCT
TTAAAGGTGG GACAAATCAC TCAAGAGCAA GAAGAGTACG CTCAGCGACT AGCGGCTCTG
TATTCTTTGC CTTTGAGCGA CAACAAAGTC GATCACGCGT GGTTGGGTGA AATGCTTGTG
CGAGTGAATG TCTTACCAGA AGCACTGGTT CTAACTCAAG CAGCAAATGA ATCTGCGTGG
GGCACTTCTC GTTTTGCCAC TCAAGCGAAC AACTTGTTCG GCCAATGGTG TTATAAAAAG
GGTTGTGGAA TTGTTCCTGC GCAACGTGGC GCAGGCAAAG CTCATGAAGT TGAAAAATTC
GATTCTGTAC AGCAGTCGGT TCATGGCTAC TTTATGAATG TTAATCGAAA CCCAGCGTAT
GCTGAACTGC GTGAAATCAG AGCTTCTCTA GCCGAAAAGA ACAAAGACCT GTTATCGGTC
GCAACGGCGT CAGAGTTAAC TCATGGATTG CTAGCATATT CTGAACGTGG CATTGCTTAT
GTACACGATC TTCGCGCTAT GATTCGTCAT AATAACGCCT ACTGGACACA ATAA
 
Protein sequence
MLSGTIKHVD LSHLPHIGDI PDFNAIKDTK EKKAAFFDFL RPKIALENQR IRHERAFLTS 
LKVGQITQEQ EEYAQRLAAL YSLPLSDNKV DHAWLGEMLV RVNVLPEALV LTQAANESAW
GTSRFATQAN NLFGQWCYKK GCGIVPAQRG AGKAHEVEKF DSVQQSVHGY FMNVNRNPAY
AELREIRASL AEKNKDLLSV ATASELTHGL LAYSERGIAY VHDLRAMIRH NNAYWTQ